Detailed information NTG0439084

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG572_RS06945
• Genome accession: NZ_CP051495
• Coordinates: 1465869..1467308 (+)
• Length: 479 a.a.
• NCBI ID: WP_202139617.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-009
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1460869..1472308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG572_RS06925 (HG572_06920)	glmS	1461502..1463295 (-)	1794	WP_202139614.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HG572_RS06930 (HG572_06925)	-	1463296..1463535 (-)	240	WP_000461836.1	DUF2443 domain-containing protein	-
HG572_RS06935 (HG572_06930)	-	1463580..1464122 (-)	543	WP_202139615.1	purine-nucleoside phosphorylase	-
HG572_RS06940 (HG572_06935)	dnaA	1464275..1465648 (+)	1374	WP_202139616.1	chromosomal replication initiator protein DnaA	-
HG572_RS06945 (HG572_06940)	comH	1465869..1467308 (+)	1440	WP_202139617.1	competence protein	Machinery gene
HG572_RS06955 (HG572_06950)	-	1467488..1468240 (+)	753	WP_100961575.1	exodeoxyribonuclease III	-
HG572_RS06960 (HG572_06955)	-	1468237..1468872 (-)	636	WP_052936600.1	outer membrane protein	-
HG572_RS06965 (HG572_06960)	-	1468876..1469223 (-)	348	WP_000837038.1	hypothetical protein	-
HG572_RS06970 (HG572_06965)	recG	1469300..1471171 (+)	1872	WP_202139618.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54856.70 Da
• Isoelectric Point: 6.5956

>NTDB_id=439084 HG572_RS06945 WP_202139617.1 1465869..1467308(+) (comH) [Helicobacter pylori strain PUNO-009]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTKIVFSSKELKEAHAHQMPSLNAPMQKPQNKPSSSQQSPQNFSYPESKLGSKNSKNSLLQPL
ITPSKTNPTNETQTPTNDTKPPLKHSSEDQENNLFITPPTEKTLPNDTSNADIDENNESNENRDNVEKQAVRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439084 HG572_RS06945 WP_202139617.1 1465869..1467308(+) (comH) [Helicobacter pylori strain PUNO-009]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATTAAAACTTCACCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATTTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACCGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACTTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCAAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCACGCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAATAAACCCAGCTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
ATAACTCCTAGCAAAACAAACCCCACTAACGAAACTCAAACGCCAACAAACGACACCAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTATAACGCCACCCACCGAAAAAACGCTCCCTAACGACACCTCTAACGCTGATATTG
ATGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCCGTTAGAGATCCTAATATTAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGACGATGAAAACTTGCAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCGACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCGCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAAAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACGATC
AAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAACGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAGCAGCCACGAG
CTAAAAGCACGCCTTTAAGTATTGAAAACTCTCGTGTGGTGTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	95.407	100	0.954