Detailed information NTG0439060

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG573_RS06955
• Genome accession: NZ_CP051494
• Coordinates: 1482223..1483665 (+)
• Length: 480 a.a.
• NCBI ID: WP_202147229.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain PUNO-010
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1477223..1488665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG573_RS06935 (HG573_06940)	glmS	1477863..1479656 (-)	1794	WP_202147226.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HG573_RS06940 (HG573_06945)	-	1479657..1479896 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HG573_RS06945 (HG573_06950)	-	1479931..1480473 (-)	543	WP_202147227.1	purine-nucleoside phosphorylase	-
HG573_RS06950 (HG573_06955)	dnaA	1480626..1481993 (+)	1368	WP_202147228.1	chromosomal replication initiator protein DnaA	-
HG573_RS06955 (HG573_06960)	comH	1482223..1483665 (+)	1443	WP_202147229.1	competence protein	Machinery gene
HG573_RS06965 (HG573_06970)	-	1483845..1484597 (+)	753	WP_187859661.1	exodeoxyribonuclease III	-
HG573_RS06970 (HG573_06975)	-	1484594..1485229 (-)	636	WP_097712980.1	outer membrane protein	-
HG573_RS06975 (HG573_06980)	-	1485233..1485580 (-)	348	WP_053576538.1	hypothetical protein	-
HG573_RS06980 (HG573_06985)	recG	1485657..1487528 (+)	1872	WP_202147230.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54896.86 Da
• Isoelectric Point: 7.4335

>NTDB_id=439060 HG573_RS06955 WP_202147229.1 1482223..1483665(+) (comH) [Helicobacter pylori strain PUNO-010]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSSHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTFTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKEPHSHQMPSLNAPMQKPQNKPHSSQQPPQNFSYPESKLGSKNSKNSLLQPL
VTPSKISPTNEVKTPTNDAKPPLKHSSQDQENNLFVTPPTEKTLPSNNTSNADSNESNENNENKDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=439060 HG573_RS06955 WP_202147229.1 1482223..1483665(+) (comH) [Helicobacter pylori strain PUNO-010]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGTCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCCAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCGCACAAAAAACTCACGTTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCCGCACTCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAATAAGCCCCACTAACGAAGTTAAAACGCCAACAAACGATGCTAAACCCCCCTTAAAACATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAGTAACAACACCTCTAACGCTGATA
GTAATGAAAGCAATGAAAATAACGAAAATAAGGATAATGTGGAAAAACAAGCGATTAGAGATCCCAATATCAAAGAATTC
GCATGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGACAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACCAGGCAATGCTATCTGATAGAAGAGCC
TTTAAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACG
ATCAAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
CGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAGGAGGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAACCAC
GAGCTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.958	100	0.94