Detailed information NTG0439039

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HG579_RS07795
• Genome accession: NZ_CP051493
• Coordinates: 1658930..1660369 (-)
• Length: 479 a.a.
• NCBI ID: WP_202133844.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain LIM-006
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1653930..1665369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HG579_RS07770 (HG579_07765)	recG	1655063..1656934 (-)	1872	WP_202133842.1	ATP-dependent DNA helicase RecG	-
HG579_RS07775 (HG579_07770)	-	1657016..1657363 (+)	348	WP_000836991.1	hypothetical protein	-
HG579_RS07780 (HG579_07775)	-	1657367..1658002 (+)	636	WP_202133843.1	outer membrane protein	-
HG579_RS07785 (HG579_07780)	-	1657999..1658751 (-)	753	WP_000767532.1	exodeoxyribonuclease III	-
HG579_RS07795 (HG579_07790)	comH	1658930..1660369 (-)	1440	WP_202133844.1	competence protein	Machinery gene
HG579_RS07800 (HG579_07795)	dnaA	1660598..1661971 (-)	1374	WP_202133845.1	chromosomal replication initiator protein DnaA	-
HG579_RS07805 (HG579_07800)	-	1662123..1662665 (+)	543	WP_187841413.1	purine-nucleoside phosphorylase	-
HG579_RS07810 (HG579_07805)	-	1662700..1662939 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HG579_RS07815 (HG579_07810)	glmS	1662940..1664733 (+)	1794	WP_202133846.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54697.65 Da
• Isoelectric Point: 7.2023

>NTDB_id=439039 HG579_RS07795 WP_202133844.1 1658930..1660369(-) (comH) [Helicobacter pylori strain LIM-006]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPKQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKEAHAHQMPSLNAPMQKPQNKPHSSQQSPQNFSYPESKLGSKNSKNSLLQPL
VTPSKVSPTNEIKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPNNTPNADASENNESNENRDNVEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDKDKEVTTDITPCDYSTAENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITRNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=439039 HG579_RS07795 WP_202133844.1 1658930..1660369(-) (comH) [Helicobacter pylori strain LIM-006]
ATGAAAAAATCCCTTTGTTTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCCAAAGAACCCAAACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACAATCACTCACATATCCACGGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATCCCTAGAAATACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAAGCGCATGCACACCAAATGCCTTCTTTAAACGCACCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAATCTCCTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTACTAACGAAATTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATGCGA
GTGAAAACAATGAAAGCAACGAAAATAGGGACAATGTGGAAAAACAAGCGATTAGAGATCCTAATATCAAAGAATTCGCA
TGCGGGAAGTGGGTTTATGATGATGAAAATTTACAAGCCTATCGCCCAAGCATTTTAAAACGCGTTGATAAAGATAAAGA
AGTTACAACAGACATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAGATCATTACCCCTTATACTAAAA
TCTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAACAATTTCGCCATTCTCCAAGCCAGA
AGCTCCACAGAAAAGTGTAAAAGGGCTAGAGCGAGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGACC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAGCAGCCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	93.946	100	0.939