Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   HGO94_RS10585 Genome accession   NZ_CP051483
Coordinates   2158270..2159157 (+) Length   295 a.a.
NCBI ID   WP_249741379.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NGA66a     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2153270..2164157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGO94_RS10555 (HGO94_07620) - 2154002..2154763 (+) 762 WP_000323441.1 alpha/beta hydrolase family protein -
  HGO94_RS10560 (HGO94_07625) - 2155008..2155463 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  HGO94_RS10565 - 2155585..2155686 (+) 102 WP_000731972.1 SE2200 family small protein -
  HGO94_RS10570 (HGO94_07635) - 2155746..2157170 (-) 1425 WP_000953748.1 alkaline phosphatase -
  HGO94_RS10575 (HGO94_07640) - 2157368..2157568 (+) 201 WP_000604727.1 hypothetical protein -
  HGO94_RS10580 (HGO94_07645) braR 2157594..2158259 (+) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  HGO94_RS10585 (HGO94_07650) braS 2158270..2159157 (+) 888 WP_249741379.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  HGO94_RS10590 (HGO94_07655) - 2159265..2160020 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  HGO94_RS10595 (HGO94_07660) - 2160017..2162017 (+) 2001 WP_000776740.1 ABC transporter permease -
  HGO94_RS10600 (HGO94_07665) - 2162676..2162789 (+) 114 Protein_2053 hypothetical protein -
  HGO94_RS10605 (HGO94_07670) - 2163171..2163431 (+) 261 WP_001791974.1 hypothetical protein -
  HGO94_RS10610 (HGO94_07675) - 2163441..2163938 (+) 498 WP_001065268.1 glutathione peroxidase -
  HGO94_RS10615 (HGO94_07680) - 2164046..2164138 (-) 93 WP_010956583.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34017.24 Da        Isoelectric Point: 5.8962

>NTDB_id=438887 HGO94_RS10585 WP_249741379.1 2158270..2159157(+) (braS) [Staphylococcus aureus strain NGA66a]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLLIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLSK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=438887 HGO94_RS10585 WP_249741379.1 2158270..2159157(+) (braS) [Staphylococcus aureus strain NGA66a]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTACTGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGTCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.644

100

0.986