Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   HGO93_RS00460 Genome accession   NZ_CP051482
Coordinates   82396..83439 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain NGA104a     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 77396..88439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGO93_RS00430 (HGO93_09910) - 77762..77873 (+) 112 Protein_85 hypothetical protein -
  HGO93_RS00435 (HGO93_09905) - 77902..78315 (+) 414 WP_001837236.1 hypothetical protein -
  HGO93_RS00440 (HGO93_09900) - 78805..79791 (-) 987 WP_000999713.1 aromatic acid exporter family protein -
  HGO93_RS00445 (HGO93_09895) map 80322..81080 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  HGO93_RS00450 (HGO93_09890) - 81297..81683 (+) 387 WP_001110179.1 hypothetical protein -
  HGO93_RS00455 (HGO93_09885) liaF 81698..82399 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  HGO93_RS00460 (HGO93_09880) vraS 82396..83439 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  HGO93_RS00465 (HGO93_09875) vraR 83429..84058 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  HGO93_RS00470 (HGO93_09870) - 84170..85381 (-) 1212 WP_000037091.1 YihY/virulence factor BrkB family protein -
  HGO93_RS00475 (HGO93_09865) - 85659..85934 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  HGO93_RS00480 (HGO93_09860) - 85941..86405 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  HGO93_RS00485 (HGO93_09855) - 86552..86752 (+) 201 WP_078153768.1 DUF1128 family protein -
  HGO93_RS00490 (HGO93_09850) - 86755..88011 (+) 1257 WP_001793428.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=438810 HGO93_RS00460 WP_001017131.1 82396..83439(+) (vraS) [Staphylococcus aureus strain NGA104a]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=438810 HGO93_RS00460 WP_001017131.1 82396..83439(+) (vraS) [Staphylococcus aureus strain NGA104a]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCGATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1