Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HGN30_RS06575 Genome accession   NZ_CP051467
Coordinates   1491914..1492315 (+) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia strain NEB515     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1486914..1497315
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGN30_RS06560 (HGN30_06560) tsaB 1488553..1489266 (+) 714 WP_005414253.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  HGN30_RS06565 (HGN30_06565) - 1489842..1490726 (-) 885 WP_005414252.1 energy transducer TonB -
  HGN30_RS06570 (HGN30_06570) gshB 1490726..1491673 (-) 948 WP_005414251.1 glutathione synthase -
  HGN30_RS06575 (HGN30_06575) pilG 1491914..1492315 (+) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  HGN30_RS06580 (HGN30_06580) - 1492334..1492696 (+) 363 WP_005410717.1 response regulator -
  HGN30_RS06585 (HGN30_06585) - 1492696..1493226 (+) 531 WP_005410716.1 chemotaxis protein CheW -
  HGN30_RS06590 (HGN30_06590) - 1493268..1495304 (+) 2037 WP_005410715.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=438701 HGN30_RS06575 WP_005418455.1 1491914..1492315(+) (pilG) [Stenotrophomonas maltophilia strain NEB515]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=438701 HGN30_RS06575 WP_005418455.1 1491914..1492315(+) (pilG) [Stenotrophomonas maltophilia strain NEB515]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677