Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | HC658_RS12220 | Genome accession | NZ_CP051466 |
| Coordinates | 2398664..2399701 (-) | Length | 345 a.a. |
| NCBI ID | WP_029317912.1 | Uniprot ID | A0A162U359 |
| Organism | Bacillus subtilis subsp. subtilis strain UCMB5021 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2393664..2404701
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HC658_RS12170 (HC658_24020) | tasA | 2393761..2394546 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| HC658_RS12175 (HC658_24030) | sipW | 2394610..2395182 (-) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| HC658_RS12180 (HC658_24040) | tapA | 2395166..2395927 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| HC658_RS12185 (HC658_24050) | yqzG | 2396199..2396525 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| HC658_RS12190 (HC658_24060) | spoIITA | 2396567..2396746 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| HC658_RS12195 (HC658_24070) | comGG | 2396818..2397192 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| HC658_RS12200 (HC658_24080) | comGF | 2397193..2397576 (-) | 384 | WP_032722118.1 | ComG operon protein ComGF | Machinery gene |
| HC658_RS12205 (HC658_24090) | comGE | 2397602..2397949 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| HC658_RS12210 (HC658_24100) | comGD | 2397933..2398364 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| HC658_RS12215 (HC658_24110) | comGC | 2398354..2398650 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| HC658_RS12220 (HC658_24120) | comGB | 2398664..2399701 (-) | 1038 | WP_029317912.1 | comG operon protein ComGB | Machinery gene |
| HC658_RS12225 (HC658_24130) | comGA | 2399688..2400758 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| HC658_RS12230 (HC658_24150) | - | 2400971..2401168 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| HC658_RS12235 (HC658_24160) | corA | 2401170..2402123 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| HC658_RS12240 (HC658_24170) | yqhB | 2402266..2403594 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| HC658_RS12245 (HC658_24180) | rsbRD | 2403647..2404483 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39662.10 Da Isoelectric Point: 9.7153
>NTDB_id=438660 HC658_RS12220 WP_029317912.1 2398664..2399701(-) (comGB) [Bacillus subtilis subsp. subtilis strain UCMB5021]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=438660 HC658_RS12220 WP_029317912.1 2398664..2399701(-) (comGB) [Bacillus subtilis subsp. subtilis strain UCMB5021]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCGAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCGAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCGAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.381 |
93.623 |
0.93 |