Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   HC658_RS07680 Genome accession   NZ_CP051466
Coordinates   1470238..1470813 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain UCMB5021     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1465238..1475813
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC658_RS07650 (HC658_15070) dapD 1465424..1466134 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  HC658_RS07655 (HC658_15080) dapI 1466204..1467328 (+) 1125 WP_032721474.1 N-acetyldiaminopimelate deacetylase -
  HC658_RS07660 (HC658_15090) ykuS 1467390..1467635 (+) 246 WP_003232382.1 YkuS family protein -
  HC658_RS07665 (HC658_15100) mscT 1467672..1468475 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  HC658_RS07670 (HC658_15110) ahpA 1468712..1469254 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  HC658_RS07675 (HC658_15120) ykuV 1469326..1469772 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  HC658_RS07680 (HC658_15130) rok 1470238..1470813 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  HC658_RS07685 (HC658_15140) cse15 1470854..1471819 (-) 966 WP_032721476.1 spore protein Cse15 -
  HC658_RS07690 (HC658_15150) mobA 1471956..1472555 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  HC658_RS07695 (HC658_15160) moeB 1472606..1473625 (+) 1020 WP_032721477.1 molybdopterin-synthase adenylyltransferase MoeB -
  HC658_RS07700 (HC658_15170) glp 1473643..1474935 (+) 1293 WP_029317736.1 gephyrin-like molybdotransferase Glp -
  HC658_RS07705 (HC658_15180) mobB 1474896..1475417 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=438644 HC658_RS07680 WP_003232378.1 1470238..1470813(+) (rok) [Bacillus subtilis subsp. subtilis strain UCMB5021]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=438644 HC658_RS07680 WP_003232378.1 1470238..1470813(+) (rok) [Bacillus subtilis subsp. subtilis strain UCMB5021]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1