Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   HC658_RS06205 Genome accession   NZ_CP051466
Coordinates   1207965..1209116 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus subtilis subsp. subtilis strain UCMB5021     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1202965..1214116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC658_RS06170 (HC658_12180) yjbB 1203636..1204853 (+) 1218 WP_074794275.1 MFS transporter -
  HC658_RS06175 (HC658_12190) yjbC 1205018..1205596 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  HC658_RS06180 (HC658_12200) spx 1205777..1206172 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  HC658_RS06185 (HC658_12210) yjbE 1206215..1206871 (-) 657 WP_003232944.1 TerC family protein -
  HC658_RS06190 - 1207041..1207181 (+) 141 WP_119122854.1 hypothetical protein -
  HC658_RS06195 (HC658_12220) mecA 1207148..1207804 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  HC658_RS06200 - 1207799..1207921 (-) 123 WP_003245684.1 hypothetical protein -
  HC658_RS06205 (HC658_12230) coiA 1207965..1209116 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  HC658_RS06210 (HC658_12240) pepF 1209346..1211175 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  HC658_RS06215 (HC658_12250) - 1211213..1211380 (-) 168 WP_003244944.1 hypothetical protein -
  HC658_RS06220 (HC658_12270) spxH 1211694..1212593 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  HC658_RS06225 (HC658_12280) bhbI 1212590..1212988 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  HC658_RS06230 (HC658_12290) cwlQ 1213243..1213977 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=438639 HC658_RS06205 WP_003245839.1 1207965..1209116(+) (coiA) [Bacillus subtilis subsp. subtilis strain UCMB5021]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=438639 HC658_RS06205 WP_003245839.1 1207965..1209116(+) (coiA) [Bacillus subtilis subsp. subtilis strain UCMB5021]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974