Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   HC660_RS07915 Genome accession   NZ_CP051464
Coordinates   1521409..1521687 (+) Length   92 a.a.
NCBI ID   WP_003244728.1    Uniprot ID   A0A199WGU6
Organism   Bacillus mojavensis strain UCMB5075     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1516409..1526687
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC660_RS07895 (HC660_15100) - 1517601..1518512 (+) 912 WP_168747676.1 ketopantoate reductase family protein -
  HC660_RS07900 (HC660_15110) - 1518540..1519772 (-) 1233 WP_168747678.1 aminopeptidase -
  HC660_RS07905 - 1519886..1520017 (-) 132 WP_010334091.1 protein YkpC -
  HC660_RS07910 (HC660_15120) mreBH 1520120..1521127 (-) 1008 WP_168747680.1 cell shape-determining protein MreBH -
  HC660_RS07915 (HC660_15130) abrB 1521409..1521687 (+) 279 WP_003244728.1 transcriptional regulator AbhA Regulator
  HC660_RS07920 (HC660_15140) - 1521875..1523161 (+) 1287 WP_010334093.1 ATP-binding protein -
  HC660_RS07925 (HC660_15150) - 1523177..1524007 (+) 831 WP_168747682.1 gamma-glutamylcyclotransferase -
  HC660_RS07930 (HC660_15160) ktrC 1524079..1524744 (+) 666 WP_010334094.1 Ktr system potassium transporter KtrC -
  HC660_RS07935 (HC660_15170) ade 1524901..1526634 (+) 1734 WP_168747684.1 adenine deaminase -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10256.07 Da        Isoelectric Point: 5.8808

>NTDB_id=438478 HC660_RS07915 WP_003244728.1 1521409..1521687(+) (abrB) [Bacillus mojavensis strain UCMB5075]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide


Download         Length: 279 bp        

>NTDB_id=438478 HC660_RS07915 WP_003244728.1 1521409..1521687(+) (abrB) [Bacillus mojavensis strain UCMB5075]
ATGAAATCAATAGGTGTTGTAAGAAAAGTAGATGAATTAGGCCGTATTGTTATGCCGATCGAGTTAAGACGGGCACTGGA
CATTGCTATTAAAGACAGCATTGAGTTTTTTGTCGACGGTGATAAAATTATTTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGGGAAATCACTTCAGAAAATAAAGAATACGGCAATGGTAAAATTACGTTAAGCCCTGAAGGTGCACAG
CTGCTTCTCGAAGAAATCCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

AbrB C-terminal domain (AbrB_C)

(53-88)

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WGU6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.242

98.913

0.576