Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   HC660_RS07795 Genome accession   NZ_CP051464
Coordinates   1497303..1497887 (+) Length   194 a.a.
NCBI ID   WP_010334068.1    Uniprot ID   A0AAP3CRU9
Organism   Bacillus mojavensis strain UCMB5075     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1492303..1502887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC660_RS07765 (HC660_14840) dapD 1492477..1493187 (+) 711 WP_168747648.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  HC660_RS07770 (HC660_14850) - 1493258..1494382 (+) 1125 WP_168747650.1 N-acetyldiaminopimelate deacetylase -
  HC660_RS07775 (HC660_14860) - 1494443..1494688 (+) 246 WP_010334064.1 YkuS family protein -
  HC660_RS07780 (HC660_14870) - 1494722..1495525 (-) 804 WP_010334065.1 mechanosensitive ion channel family protein -
  HC660_RS07785 (HC660_14880) ahpA 1495770..1496312 (+) 543 WP_010334066.1 biofilm-specific peroxidase AhpA -
  HC660_RS07790 (HC660_14890) ykuV 1496393..1496851 (+) 459 WP_010334067.1 thiol-disulfide oxidoreductase YkuV -
  HC660_RS07795 (HC660_14900) rok 1497303..1497887 (+) 585 WP_010334068.1 transcriptional regulator Rok Regulator
  HC660_RS07800 (HC660_14910) - 1497930..1498895 (-) 966 WP_168747652.1 sporulation protein -
  HC660_RS07805 (HC660_14920) - 1499028..1499627 (+) 600 WP_168747654.1 molybdenum cofactor guanylyltransferase -
  HC660_RS07810 (HC660_14930) - 1499679..1500698 (+) 1020 WP_168747656.1 MoeB/ThiF family adenylyltransferase -
  HC660_RS07815 (HC660_14940) glp 1500716..1502008 (+) 1293 WP_168747658.1 gephyrin-like molybdotransferase Glp -
  HC660_RS07820 (HC660_14950) mobB 1501969..1502490 (+) 522 WP_168747660.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22131.11 Da        Isoelectric Point: 9.7169

>NTDB_id=438477 HC660_RS07795 WP_010334068.1 1497303..1497887(+) (rok) [Bacillus mojavensis strain UCMB5075]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQTISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESVESTESATE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=438477 HC660_RS07795 WP_010334068.1 1497303..1497887(+) (rok) [Bacillus mojavensis strain UCMB5075]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAAACTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACAAGAAGAAG
AAGAGGAACGGCAAGACCGGGGTCAAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGTTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTGGAAATTCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTATCCTGAAGTGAAAAAACCGTATCGTGGCCAGTACATTTTAGAGGGCGAAATCGAATCCGTTGA
ATCAACTGAATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.709

97.423

0.923