Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HC660_RS07690 Genome accession   NZ_CP051464
Coordinates   1481047..1481511 (-) Length   154 a.a.
NCBI ID   WP_168747640.1    Uniprot ID   -
Organism   Bacillus mojavensis strain UCMB5075     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1476047..1486511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC660_RS07670 (HC660_14650) kinA 1476299..1478119 (+) 1821 WP_168747635.1 sporulation histidine kinase KinA -
  HC660_RS07675 (HC660_14660) - 1478143..1479312 (-) 1170 WP_010334041.1 aminotransferase A -
  HC660_RS07680 (HC660_14670) - 1479514..1479675 (-) 162 WP_168747637.1 hypothetical protein -
  HC660_RS07685 (HC660_14680) cheV 1479883..1480794 (+) 912 WP_168747638.1 chemotaxis protein CheV -
  HC660_RS07690 (HC660_14690) kre 1481047..1481511 (-) 465 WP_168747640.1 YkyB family protein Regulator
  HC660_RS07695 (HC660_14700) - 1481636..1482928 (-) 1293 WP_168747642.1 MFS transporter -
  HC660_RS07700 (HC660_14710) - 1483004..1483498 (-) 495 WP_081720804.1 L,D-transpeptidase family protein -
  HC660_RS07705 (HC660_14720) - 1483556..1484416 (-) 861 WP_168747644.1 metallophosphoesterase -
  HC660_RS07710 (HC660_14730) fadH 1484561..1485325 (+) 765 WP_168747645.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17840.63 Da        Isoelectric Point: 10.4212

>NTDB_id=438476 HC660_RS07690 WP_168747640.1 1481047..1481511(-) (kre) [Bacillus mojavensis strain UCMB5075]
MDDHAYSKDLQPTVDNLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQQYVGMKEKPLVANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=438476 HC660_RS07690 WP_168747640.1 1481047..1481511(-) (kre) [Bacillus mojavensis strain UCMB5075]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGATAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCCAAAAATCCAAGGTTCAGCCAGCAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAACAATACGTCGGCATGAAAGAAAAGCCGCTTGTGG
CGAATCGCCAGCAGCCTGCATATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

97.403

100

0.974