Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   HC661_RS14870 Genome accession   NZ_CP051463
Coordinates   3022814..3022954 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain UCMB5140     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3017814..3027954
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HC661_RS14845 (HC661_28500) - 3018127..3018510 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  HC661_RS14850 (HC661_28510) comA 3018532..3019176 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  HC661_RS14855 - 3019257..3021609 (-) 2353 Protein_2878 histidine kinase -
  HC661_RS14860 comX 3021587..3021757 (-) 171 WP_015418105.1 competence pheromone ComX -
  HC661_RS14865 (HC661_28530) - 3021754..3022683 (-) 930 WP_015418106.1 polyprenyl synthetase family protein -
  HC661_RS14870 (HC661_28540) degQ 3022814..3022954 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  HC661_RS14875 (HC661_28550) - 3023417..3023758 (+) 342 WP_015418107.1 hypothetical protein -
  HC661_RS14880 (HC661_28560) - 3023765..3024988 (-) 1224 WP_015418108.1 EAL and HDOD domain-containing protein -
  HC661_RS14885 (HC661_28570) - 3025119..3026585 (-) 1467 WP_015418109.1 nicotinate phosphoribosyltransferase -
  HC661_RS14890 (HC661_28580) - 3026603..3027154 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  HC661_RS14895 (HC661_28590) - 3027251..3027649 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=438432 HC661_RS14870 WP_003152043.1 3022814..3022954(-) (degQ) [Bacillus velezensis strain UCMB5140]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=438432 HC661_RS14870 WP_003152043.1 3022814..3022954(-) (degQ) [Bacillus velezensis strain UCMB5140]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891