Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   HGI30_RS03445 Genome accession   NZ_CP051428
Coordinates   764148..765938 (+) Length   596 a.a.
NCBI ID   WP_235680397.1    Uniprot ID   -
Organism   Paenibacillus albicereus strain UniB2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 759148..770938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGI30_RS03430 (HGI30_03430) - 759853..760500 (+) 648 WP_168906374.1 amino acid ABC transporter permease -
  HGI30_RS03435 (HGI30_03435) - 761797..762201 (+) 405 WP_168906375.1 MarR family winged helix-turn-helix transcriptional regulator -
  HGI30_RS03440 (HGI30_03440) rcrP 762311..764089 (+) 1779 WP_168906376.1 ABC transporter ATP-binding protein Regulator
  HGI30_RS03445 (HGI30_03445) rcrQ 764148..765938 (+) 1791 WP_235680397.1 ABC transporter ATP-binding protein Regulator
  HGI30_RS03450 (HGI30_03450) - 766240..766899 (+) 660 WP_168906378.1 FusB/FusC family EF-G-binding protein -
  HGI30_RS03455 (HGI30_03455) - 766940..767521 (+) 582 WP_168906379.1 TIGR00730 family Rossman fold protein -
  HGI30_RS03460 (HGI30_03460) - 767539..768021 (+) 483 WP_168906380.1 GNAT family N-acetyltransferase -
  HGI30_RS03465 (HGI30_03465) - 768108..768665 (+) 558 WP_168906381.1 cysteine hydrolase family protein -
  HGI30_RS03470 (HGI30_03470) - 769425..770642 (-) 1218 WP_168906382.1 ATP-binding protein -

Sequence

Protein


Download         Length: 596 a.a.        Molecular weight: 64975.22 Da        Isoelectric Point: 5.7051

>NTDB_id=438200 HGI30_RS03445 WP_235680397.1 764148..765938(+) (rcrQ) [Paenibacillus albicereus strain UniB2]
MGGPMGGGMAPGDKAKDFRATLRKLAAYCRKYMPIIVLSLVLALAGSALNVIGPDLLRDITDKIQEGIRGTIDIDAINRI
VLLLAALYGAGLIFNYAQGFIMATVTQRITNKMRTEISAKINRMPLRYFDSTSYGNVLSRVTNDIDMIGQTLNNSLGMLV
SSVALFVGALVMMVYTNWILALTAVVSTILGFALMSVIMKHSQRYFVAQQEVLGRLNGHIEETYSGHAVVKAYNAEDEAK
AAFHDLNGKLYGSAWKSQFMSGLMMPIMGFVGNLGYVAICVVGAMLVTSDSISIGTIVAFMIYIRLFTQPLGQIAQAATN
LQAAAAAGERVFEFLEEEELADEGGKTAKLANVKGDVEFRHVRFGYAADKDVIKDFSMKAEAGQKIAIVGPTGAGKTTLV
NLLMRFYELNGGEILVDGMPIDRMTREDVHSLFSMVLQDTWLFEGTIRDNIAFSRPDVTDAQIEEACRAVGLDHFIRTLP
EGYGTVLGDRASLSAGQKQLLTIARAMIDDAPLLILDEATSSVDTRTELLIQRAMDRLSAGKTSFVIAHRLSTIKNADRI
LVMKDGDILETGTHDELLARGGFYAELYNSQFEQVS

Nucleotide


Download         Length: 1791 bp        

>NTDB_id=438200 HGI30_RS03445 WP_235680397.1 764148..765938(+) (rcrQ) [Paenibacillus albicereus strain UniB2]
ATGGGCGGACCGATGGGGGGCGGCATGGCGCCGGGCGACAAGGCGAAGGACTTCCGCGCCACGCTTCGCAAGCTGGCCGC
CTACTGCCGGAAGTACATGCCGATCATCGTGCTGTCGCTCGTGCTCGCGCTGGCCGGGTCCGCGCTGAACGTCATCGGGC
CGGACCTGCTGCGCGACATCACCGACAAGATCCAGGAAGGCATCCGGGGGACGATCGACATCGATGCGATCAACCGGATC
GTGCTGCTGCTCGCGGCGCTGTACGGCGCCGGCCTGATCTTCAACTACGCGCAGGGGTTCATCATGGCGACGGTCACCCA
GCGTATCACGAACAAGATGCGGACCGAGATTTCCGCTAAAATCAACCGCATGCCGCTGCGCTACTTCGACTCGACGAGCT
ACGGCAACGTGCTGAGCCGCGTCACCAACGACATCGACATGATCGGCCAGACGCTGAACAACAGCCTCGGCATGCTCGTC
TCGTCCGTCGCCTTGTTCGTCGGCGCGCTCGTCATGATGGTGTACACGAACTGGATCCTCGCGCTCACGGCCGTCGTCTC
GACGATCCTCGGCTTCGCGCTCATGAGCGTCATCATGAAGCACTCGCAGCGCTATTTCGTCGCCCAGCAGGAGGTGCTCG
GGCGGCTCAACGGCCATATCGAGGAGACCTACTCCGGCCATGCGGTCGTCAAGGCGTACAACGCCGAGGACGAGGCCAAG
GCCGCCTTCCACGACCTGAACGGCAAGCTGTACGGCAGCGCTTGGAAGTCGCAGTTCATGTCCGGCCTCATGATGCCGAT
CATGGGCTTCGTCGGCAACCTCGGCTACGTCGCGATCTGCGTCGTCGGCGCGATGCTCGTCACCTCGGACTCGATCAGCA
TCGGCACGATCGTCGCGTTCATGATCTACATCCGGCTGTTCACGCAGCCGCTCGGCCAGATCGCCCAGGCGGCGACCAAC
CTGCAGGCGGCGGCAGCCGCGGGCGAGCGCGTCTTCGAATTCCTCGAGGAGGAGGAGCTGGCGGACGAAGGCGGCAAGAC
GGCGAAGCTGGCGAACGTCAAAGGCGACGTCGAATTCCGCCATGTCCGCTTCGGCTACGCGGCCGACAAGGACGTCATCA
AGGACTTCTCGATGAAGGCGGAGGCCGGGCAAAAGATCGCCATCGTCGGCCCGACCGGAGCCGGCAAGACGACGCTCGTC
AACCTGCTCATGCGGTTCTACGAGCTGAACGGAGGCGAGATCCTCGTCGACGGAATGCCGATCGACCGGATGACGCGGGA
GGACGTGCATAGCCTGTTCAGCATGGTGCTGCAGGATACCTGGCTGTTCGAGGGCACGATCCGCGACAACATCGCCTTCT
CCCGTCCGGACGTCACGGATGCGCAGATCGAGGAGGCCTGCCGCGCCGTCGGCCTGGACCACTTCATCCGCACGCTGCCG
GAAGGCTACGGCACCGTGCTGGGCGACCGCGCCAGCCTGTCGGCCGGGCAGAAGCAGCTGCTCACGATCGCGCGGGCGAT
GATCGACGACGCGCCGCTGCTCATCCTCGACGAGGCGACCAGCTCCGTCGACACGCGCACCGAGCTGCTCATCCAGCGCG
CGATGGACCGCCTGTCCGCCGGCAAGACGTCGTTCGTCATCGCCCACCGGCTGTCCACGATCAAGAACGCCGACCGCATC
CTCGTCATGAAGGACGGCGACATCCTCGAGACGGGCACGCATGACGAGCTGCTGGCGCGGGGCGGCTTCTACGCCGAGCT
GTACAACAGCCAGTTCGAGCAGGTTTCCTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(374-521)

ABC transporter transmembrane region (ABC_membrane)

(37-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

55.729

96.644

0.539