Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   HGI30_RS03440 Genome accession   NZ_CP051428
Coordinates   762311..764089 (+) Length   592 a.a.
NCBI ID   WP_168906376.1    Uniprot ID   A0A6H2GTH0
Organism   Paenibacillus albicereus strain UniB2     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 757311..769089
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGI30_RS03420 (HGI30_03420) - 758015..758515 (+) 501 Protein_644 acyl-CoA thioesterase -
  HGI30_RS03425 (HGI30_03425) - 758941..759744 (+) 804 WP_168906373.1 transporter substrate-binding domain-containing protein -
  HGI30_RS03430 (HGI30_03430) - 759853..760500 (+) 648 WP_168906374.1 amino acid ABC transporter permease -
  HGI30_RS03435 (HGI30_03435) - 761797..762201 (+) 405 WP_168906375.1 MarR family winged helix-turn-helix transcriptional regulator -
  HGI30_RS03440 (HGI30_03440) rcrP 762311..764089 (+) 1779 WP_168906376.1 ABC transporter ATP-binding protein Regulator
  HGI30_RS03445 (HGI30_03445) rcrQ 764148..765938 (+) 1791 WP_235680397.1 ABC transporter ATP-binding protein Regulator
  HGI30_RS03450 (HGI30_03450) - 766240..766899 (+) 660 WP_168906378.1 FusB/FusC family EF-G-binding protein -
  HGI30_RS03455 (HGI30_03455) - 766940..767521 (+) 582 WP_168906379.1 TIGR00730 family Rossman fold protein -
  HGI30_RS03460 (HGI30_03460) - 767539..768021 (+) 483 WP_168906380.1 GNAT family N-acetyltransferase -
  HGI30_RS03465 (HGI30_03465) - 768108..768665 (+) 558 WP_168906381.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 592 a.a.        Molecular weight: 64404.41 Da        Isoelectric Point: 6.8822

>NTDB_id=438199 HGI30_RS03440 WP_168906376.1 762311..764089(+) (rcrP) [Paenibacillus albicereus strain UniB2]
MLKLFKYLTKGEWGFVLYSLIFIIVQVWLDLRLPDYMAEITTLIQTEGTRAADLLEPGVYMLLCAVGSVLTSVIVGWFAA
KVAAGLAMRLRGMVFDRTLSFSHQEINGFSTASLITRSTNDVTQVQMIVAMGLQVMLKAPILAVWAIAKISGKSWQWTAA
TGGAVAALIVMLTVIILFAIPKFRIIQGLTDNLNRITRENLTGLRVIRAYNAAPYQEAKFDRANRELTGTNLYASRLMAI
IGPGMTLIMSGLSVSIYAIGAYLIQDAPGTDRIGIFSDMVVFTSYAMQVVMAFMMVSMIFIMAPRASISAKRILEVLRTE
AAIRDGAETAGSGEGGVEFRDVSFTYPGAEEPVLRNISFKARKGETVAIIGSTGSGKTSVLNLIPRFYDVAEGEVLVDGI
DVRRYSQHALRAKLGYVSQRAVLFSGTVSGNVAYGGSAAPGSDAEEGVRRAVAIAQGTDFVERMEGQYEGRIAQGGDNVS
GGQKQRLSIARAVYRQPDIYLFDDSFSALDYRTDRELRAALRRETGGATTIIVAQRIGTIKDADRILVLEDGRIVGSGTH
EELLQDCETYQEIALSQLSKEELGHGPIESAL

Nucleotide


Download         Length: 1779 bp        

>NTDB_id=438199 HGI30_RS03440 WP_168906376.1 762311..764089(+) (rcrP) [Paenibacillus albicereus strain UniB2]
ATGCTGAAGCTGTTCAAGTACCTGACGAAGGGCGAGTGGGGGTTCGTCCTGTACAGCCTGATCTTCATCATCGTCCAGGT
GTGGCTCGACCTGCGGCTGCCGGACTACATGGCCGAGATCACGACGCTCATCCAGACAGAGGGCACGCGCGCGGCCGATC
TGCTGGAGCCGGGCGTCTACATGCTGCTGTGCGCCGTCGGCAGCGTCCTGACGTCGGTCATCGTCGGCTGGTTCGCCGCC
AAGGTGGCGGCGGGGCTGGCGATGCGCCTGCGCGGCATGGTGTTCGACCGGACGCTGTCGTTCTCCCATCAAGAGATCAA
CGGCTTCTCGACGGCCAGCCTCATCACGCGCTCGACCAATGACGTCACCCAAGTCCAGATGATCGTGGCAATGGGGCTGC
AGGTGATGCTCAAGGCTCCGATCCTCGCCGTCTGGGCGATCGCCAAAATTTCCGGCAAGAGCTGGCAGTGGACGGCCGCG
ACCGGCGGCGCCGTAGCGGCGCTGATCGTCATGCTGACCGTCATCATCCTGTTCGCGATTCCCAAATTCCGCATCATCCA
AGGGCTGACCGATAATCTCAACCGCATCACCCGCGAGAACCTGACCGGCCTGCGCGTCATCCGCGCCTACAACGCGGCGC
CATACCAGGAAGCCAAGTTCGACCGGGCGAATCGCGAGCTCACCGGCACGAACCTGTACGCCAGCCGCCTGATGGCGATC
ATCGGTCCCGGCATGACGCTCATCATGTCCGGCCTCAGCGTCTCGATCTACGCGATCGGCGCCTACCTGATCCAGGATGC
GCCGGGCACGGACCGCATCGGAATCTTTTCCGACATGGTCGTCTTCACCTCGTACGCGATGCAGGTGGTGATGGCGTTCA
TGATGGTGAGCATGATCTTCATCATGGCGCCGCGGGCATCCATCTCGGCCAAGCGGATTCTCGAGGTGCTCCGCACGGAG
GCCGCCATCCGGGACGGAGCCGAGACGGCAGGCAGCGGGGAGGGCGGAGTCGAGTTCCGCGACGTCAGCTTCACCTATCC
GGGAGCGGAGGAGCCGGTGCTGCGCAACATCAGCTTCAAGGCGCGCAAAGGCGAGACGGTGGCGATCATCGGCTCGACCG
GCAGCGGCAAGACGAGCGTGCTGAACCTGATCCCGCGCTTCTACGACGTCGCCGAGGGCGAAGTGCTCGTCGACGGCATC
GACGTGCGCCGGTACAGCCAGCACGCCTTGCGCGCCAAGCTCGGCTACGTCTCCCAGCGGGCGGTGCTGTTCAGCGGCAC
GGTCTCCGGCAACGTCGCCTACGGCGGCAGCGCCGCGCCGGGGAGCGACGCCGAGGAAGGCGTCCGGAGGGCTGTCGCGA
TCGCCCAGGGAACGGATTTTGTCGAGCGGATGGAAGGGCAGTACGAGGGCCGCATCGCCCAGGGCGGAGACAACGTCTCC
GGCGGGCAGAAGCAGCGGCTGTCGATCGCGCGCGCCGTCTACCGGCAGCCGGACATCTACCTGTTCGACGACTCGTTCTC
GGCGCTCGACTACCGGACCGACCGCGAGCTGCGCGCGGCGCTGCGCCGGGAGACCGGCGGCGCGACGACGATCATCGTCG
CCCAGCGCATCGGCACGATCAAGGACGCCGACCGCATCCTCGTGCTCGAGGACGGACGCATCGTCGGCAGCGGCACGCAT
GAGGAGCTGCTGCAGGATTGCGAGACGTATCAGGAGATCGCCCTTTCCCAGCTATCCAAGGAGGAACTCGGCCATGGCCC
AATCGAATCAGCCTTATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(354-505)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H2GTH0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.745

100

0.535