Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   HGI30_RS00280 Genome accession   NZ_CP051428
Coordinates   57905..58858 (+) Length   317 a.a.
NCBI ID   WP_168905883.1    Uniprot ID   A0A6H2GS69
Organism   Paenibacillus albicereus strain UniB2     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 52905..63858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGI30_RS00260 (HGI30_00260) - 53158..55005 (+) 1848 WP_168905880.1 oligosaccharide flippase family protein -
  HGI30_RS00265 (HGI30_00265) mazG 55212..56834 (+) 1623 WP_168905881.1 nucleoside triphosphate pyrophosphohydrolase -
  HGI30_RS00270 (HGI30_00270) - 57071..57373 (+) 303 WP_407945026.1 HU family DNA-binding protein -
  HGI30_RS00275 (HGI30_00275) - 57374..57655 (+) 282 WP_168905882.1 RNA-binding S4 domain-containing protein -
  HGI30_RS00280 (HGI30_00280) ceuB 57905..58858 (+) 954 WP_168905883.1 ABC transporter permease Machinery gene
  HGI30_RS00285 (HGI30_00285) - 58848..59813 (+) 966 WP_168905884.1 iron chelate uptake ABC transporter family permease subunit -
  HGI30_RS00290 (HGI30_00290) - 59810..60568 (+) 759 WP_168905885.1 ABC transporter ATP-binding protein -
  HGI30_RS00295 (HGI30_00295) - 60608..61612 (+) 1005 WP_168905886.1 siderophore ABC transporter substrate-binding protein -
  HGI30_RS00300 (HGI30_00300) yabP 61751..62035 (+) 285 WP_168905887.1 sporulation protein YabP -
  HGI30_RS00305 (HGI30_00305) yabQ 62032..62640 (+) 609 WP_328805205.1 spore cortex biosynthesis protein YabQ -
  HGI30_RS00310 (HGI30_00310) - 62698..62988 (+) 291 WP_168905888.1 septum formation initiator family protein -
  HGI30_RS00315 (HGI30_00315) - 63149..63736 (+) 588 WP_168905889.1 S1 domain-containing RNA-binding protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 34106.06 Da        Isoelectric Point: 10.0062

>NTDB_id=438192 HGI30_RS00280 WP_168905883.1 57905..58858(+) (ceuB) [Paenibacillus albicereus strain UniB2]
MRLSILLPLLAALSFLSLFVGVSPLSPADLLSLTPDQQELLRISRLPRLASLIIAGMSLSIAGLIMQQLSRNKFVSPSTA
GTMEAAGLGLLVSLLLFDSAGMLVKMAISFGFALAGTLVFMRMLDRIKFKDAVFIPLVGLMFGGVLASLTTFFAYRYDLI
QSIGSWMQGSFTGVMQGRYELLYISVPATLLAYAFASRFTIAGMGEDFALNLGLSYRKIVNLGLVLVALISSSIILTVGV
IPFLGLIVPNLVSIFRGDNLKKNLPVTAVFGAVFVLACDILGRVLIHPYELPISLIVGVLGSVIFLYLLLRRDAYAG

Nucleotide


Download         Length: 954 bp        

>NTDB_id=438192 HGI30_RS00280 WP_168905883.1 57905..58858(+) (ceuB) [Paenibacillus albicereus strain UniB2]
ATGAGGCTGTCGATCCTGCTGCCGCTGCTGGCGGCGCTGTCCTTCCTCTCCTTGTTCGTCGGCGTCTCGCCGCTATCCCC
GGCCGACCTGCTCTCGCTGACGCCCGACCAGCAGGAGCTGCTGCGGATCAGCCGCCTGCCGAGGCTGGCCAGCCTCATCA
TCGCCGGCATGAGCCTCAGCATCGCCGGGCTCATCATGCAGCAGCTGAGCCGCAACAAGTTCGTCTCGCCGTCGACGGCG
GGCACGATGGAGGCGGCGGGGCTCGGGCTGCTTGTCTCGCTGCTCCTCTTCGACAGCGCCGGCATGCTGGTCAAGATGGC
CATCAGCTTCGGCTTCGCGTTAGCCGGCACGCTCGTCTTCATGCGGATGCTCGATCGGATCAAGTTCAAGGACGCGGTCT
TCATTCCGCTGGTCGGGCTCATGTTCGGCGGCGTGCTGGCCAGCCTCACGACGTTTTTCGCCTACCGCTACGATCTGATC
CAGAGCATCGGCTCCTGGATGCAGGGCAGCTTCACCGGCGTCATGCAAGGGCGCTATGAGCTGCTGTACATCAGCGTCCC
GGCGACGCTGCTCGCCTATGCGTTCGCAAGCCGCTTCACGATCGCCGGCATGGGGGAGGACTTCGCGCTGAACCTCGGCC
TCAGCTACCGCAAGATCGTGAACCTCGGGCTCGTGCTGGTGGCGCTCATCAGCAGCTCGATCATCCTGACAGTCGGCGTC
ATTCCGTTCCTCGGCCTGATCGTTCCGAACCTGGTCTCGATCTTCCGCGGCGACAACCTCAAGAAGAACCTGCCGGTGAC
GGCCGTATTCGGAGCGGTGTTCGTGCTCGCCTGCGACATCCTGGGACGGGTGCTGATCCATCCGTACGAGCTGCCGATCA
GCCTGATCGTCGGCGTGCTGGGAAGCGTCATCTTCCTCTATCTCCTCTTGAGGAGGGATGCTTATGCCGGCTGA

Domains


Predicted by InterproScan.

(9-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6H2GS69

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.165

99.685

0.53