Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   IM723_RS05505 Genome accession   NZ_CP063275
Coordinates   1053041..1053523 (-) Length   160 a.a.
NCBI ID   WP_065973247.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain DMST-H2     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1048041..1058523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IM723_RS05485 pepT 1048522..1049745 (-) 1224 WP_014608366.1 peptidase T -
  IM723_RS05490 lepB 1049953..1050510 (-) 558 WP_065973243.1 signal peptidase I -
  IM723_RS05495 - 1050633..1051862 (-) 1230 WP_011681192.1 tetratricopeptide repeat protein -
  IM723_RS05500 - 1051852..1053030 (-) 1179 WP_096811486.1 AI-2E family transporter -
  IM723_RS05505 mutX 1053041..1053523 (-) 483 WP_065973247.1 8-oxo-dGTP diphosphatase Machinery gene
  IM723_RS05510 ftsX 1053679..1054608 (-) 930 WP_011681194.1 permease-like cell division protein FtsX -
  IM723_RS05515 ftsE 1054601..1055293 (-) 693 WP_022096763.1 cell division ATP-binding protein FtsE -
  IM723_RS05525 queG 1056532..1057650 (-) 1119 WP_211836785.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18888.40 Da        Isoelectric Point: 4.7217

>NTDB_id=437745 IM723_RS05505 WP_065973247.1 1053041..1053523(-) (mutX) [Streptococcus thermophilus strain DMST-H2]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETRLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDK

Nucleotide


Download         Length: 483 bp        

>NTDB_id=437745 IM723_RS05505 WP_065973247.1 1053041..1053523(-) (mutX) [Streptococcus thermophilus strain DMST-H2]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCGTTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATAAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706