Detailed information NTG0437274

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HGI45_RS06990
• Genome accession: NZ_CP051292
• Coordinates: 1492428..1493870 (+)
• Length: 480 a.a.
• NCBI ID: WP_202137008.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-003
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1487428..1498870

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGI45_RS06970 (HGI45_06975)	glmS	1488063..1489856 (-)	1794	WP_202137006.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
HGI45_RS06975 (HGI45_06980)	-	1489857..1490096 (-)	240	WP_000461837.1	DUF2443 domain-containing protein	-
HGI45_RS06980 (HGI45_06985)	-	1490131..1490673 (-)	543	WP_202137007.1	purine-nucleoside phosphorylase	-
HGI45_RS06985 (HGI45_06990)	dnaA	1490826..1492199 (+)	1374	WP_147746438.1	chromosomal replication initiator protein DnaA	-
HGI45_RS06990 (HGI45_06995)	comH	1492428..1493870 (+)	1443	WP_202137008.1	competence protein	Machinery gene
HGI45_RS07000 (HGI45_07005)	-	1494050..1494802 (+)	753	WP_202137009.1	exodeoxyribonuclease III	-
HGI45_RS07005 (HGI45_07010)	-	1494799..1495434 (-)	636	WP_021176833.1	outer membrane protein	-
HGI45_RS07010 (HGI45_07015)	-	1495438..1495785 (-)	348	WP_120867890.1	hypothetical protein	-
HGI45_RS07015 (HGI45_07020)	recG	1495867..1497738 (+)	1872	WP_202137010.1	ATP-dependent DNA helicase RecG	-

Sequence

Protein

• Length: 480 a.a.
• Molecular weight: 54821.90 Da
• Isoelectric Point: 7.1642

>NTDB_id=437274 HGI45_RS06990 WP_202137008.1 1492428..1493870(+) (comH) [Helicobacter pylori strain ASHA-003]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRSTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTSSQQPLQNFSYPESKLGSKNPKNSLLQPL
VTPSKVSPANEVKTPTNDANPPLKHSSQDQENNLFVAPPTEKTLPSNNTPNADASENNESNENKDNVEKQAIRDPNIKEF
ACGKWVYDDENLQAYRPSILKRIDKDKEVTTDITPCDYSTTENKSGKIITPYTKISVHKTEPLEDPQTFEAKNNFAILQA
RSSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAVYERPKQDDQIEPTFYETSELAYSSTRKSEITRNE
LNLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1443 bp

>NTDB_id=437274 HGI45_RS06990 WP_202137008.1 1492428..1493870(+) (comH) [Helicobacter pylori strain ASHA-003]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTCATTGAGCTTTTAGAAGA
GATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCCAAAGAACCCAGACAAGTTTTAGGGGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCTAGAAGCACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAACTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTTCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGGCTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GTAACTCCTAGCAAAGTAAGCCCTGCTAATGAAGTTAAAACGCCAACAAACGACGCTAATCCCCCTTTAAAACATTCTTC
ACAAGATCAAGAAAACAACCTCTTTGTAGCGCCACCCACTGAAAAAACGCTCCCTAGTAACAACACCCCTAACGCTGATG
CGAGTGAAAACAATGAAAGCAACGAAAATAAGGATAATGTGGAAAAACAAGCGATTAGAGATCCTAATATTAAGGAATTT
GCATGCGGGAAGTGGGTTTATGATGATGAAAATCTACAAGCCTATCGCCCAAGCATTTTAAAACGCATTGATAAAGACAA
AGAGGTTACAACAGACATTACCCCTTGCGATTACAGCACCACTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTA
AAATTTCTGTTCATAAAACAGAGCCTTTAGAAGACCCTCAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCC
AGAAGCTCTACAGAAAAATGCAAAAGGGCTAGAGCGAGGAAAGACGGTACGACCAGGCAATGCTATCTAATAGAAGAGCC
TTTAAAACAAGCGTGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCGTATATGAACGCCCCAAACAAGACG
ATCAAATAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCGCAATGAA
TTGAATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATCAAAGAGAGCAG
TGAATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCCTTAGAAATAGAAGAACAACCAC
GAGCCAAAAGCACGCCTTTGAGCATTGAAAACTCTCGTGTTGTGTGTGTCAAAAAGGGGAATTATTTATTCAATGAAGTT
TGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.917	100	0.929