Detailed information NTG0437245

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HGI44_RS01620
• Genome accession: NZ_CP051291
• Coordinates: 330705..331505 (+)
• Length: 266 a.a.
• NCBI ID: WP_202133080.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-002
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 325705..336505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGI44_RS01585 (HGI44_01590)	pseH	326207..326749 (+)	543	WP_202135742.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HGI44_RS01590 (HGI44_01595)	-	326682..327620 (-)	939	WP_202135743.1	tetraacyldisaccharide 4'-kinase	-
HGI44_RS01595 (HGI44_01600)	-	327617..328399 (-)	783	WP_202133077.1	NAD+ synthase	-
HGI44_RS01605 (HGI44_01610)	ilvC	328646..329638 (+)	993	WP_202133078.1	ketol-acid reductoisomerase	-
HGI44_RS01610 (HGI44_01615)	minD	329657..330463 (+)	807	WP_202133079.1	septum site-determining protein MinD	-
HGI44_RS01615 (HGI44_01620)	minE	330460..330693 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HGI44_RS01620 (HGI44_01625)	dprA	330705..331505 (+)	801	WP_202133080.1	DNA-processing protein DprA	Machinery gene
HGI44_RS01625 (HGI44_01630)	dprB	331502..331906 (+)	405	WP_202133081.1	Holliday junction resolvase RuvX	Machinery gene
HGI44_RS01630 (HGI44_01635)	-	332034..332714 (+)	681	WP_202136378.1	tetratricopeptide repeat protein	-
HGI44_RS01635 (HGI44_01640)	-	332910..333248 (+)	339	WP_202136379.1	hypothetical protein	-
HGI44_RS01640 (HGI44_01645)	-	333232..333798 (+)	567	WP_202133084.1	hypothetical protein	-
HGI44_RS08130 (HGI44_01650)	-	333810..334201 (+)	392	Protein_318	lysozyme	-
HGI44_RS07970	-	334222..334398 (+)	177	WP_237389502.1	lysozyme	-
HGI44_RS07975 (HGI44_01660)	-	334491..334676 (+)	186	WP_014534380.1	hypothetical protein	-
HGI44_RS01660 (HGI44_01665)	-	334830..335216 (+)	387	WP_202133397.1	DUF1294 domain-containing protein	-
HGI44_RS01665 (HGI44_01670)	-	335216..336001 (+)	786	WP_202135746.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29816.72 Da
• Isoelectric Point: 8.5925

>NTDB_id=437245 HGI44_RS01620 WP_202133080.1 330705..331505(+) (dprA) [Helicobacter pylori strain ASHA-002]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=437245 HGI44_RS01620 WP_202133080.1 330705..331505(+) (dprA) [Helicobacter pylori strain ASHA-002]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAACATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41