Detailed information NTG0437234

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: HGI43_RS07360
• Genome accession: NZ_CP051290
• Coordinates: 1533717..1535156 (-)
• Length: 479 a.a.
• NCBI ID: WP_202135553.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-001
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1528717..1540156

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGI43_RS07335 (HGI43_07320)	recG	1529854..1531725 (-)	1872	WP_202132843.1	ATP-dependent DNA helicase RecG	-
HGI43_RS07340 (HGI43_07325)	-	1531807..1532151 (+)	345	WP_202132844.1	hypothetical protein	-
HGI43_RS07345 (HGI43_07330)	-	1532155..1532790 (+)	636	WP_202132845.1	outer membrane protein	-
HGI43_RS07350 (HGI43_07335)	-	1532787..1533539 (-)	753	WP_000767499.1	exodeoxyribonuclease III	-
HGI43_RS07360 (HGI43_07345)	comH	1533717..1535156 (-)	1440	WP_202135553.1	competence protein	Machinery gene
HGI43_RS07365 (HGI43_07350)	dnaA	1535385..1536752 (-)	1368	WP_202135554.1	chromosomal replication initiator protein DnaA	-
HGI43_RS07370 (HGI43_07355)	-	1536904..1537440 (+)	537	WP_202135555.1	purine-nucleoside phosphorylase	-
HGI43_RS07375 (HGI43_07360)	-	1537487..1537726 (+)	240	WP_000461845.1	DUF2443 domain-containing protein	-
HGI43_RS07380 (HGI43_07365)	glmS	1537727..1539520 (+)	1794	WP_202135556.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 55035.01 Da
• Isoelectric Point: 6.6636

>NTDB_id=437234 HGI43_RS07360 WP_202135553.1 1533717..1535156(-) (comH) [Helicobacter pylori strain ASHA-001]
MKKTLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKEPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKELHPHQMPSLNAPIQKPQNKPTPSQQPLQNFSYPESKLDSKNPKNSLLQPL
ATLNKTSLANEVKTPTNDTKPPLKHSSEDQENNLFVTPPTEKTLPNNTPNADINEHNESNENRDNAEKQAIRDPNIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSNAENKSGKITTPYTKISVQKTEPLEEPQTFEAKNNFTILQAR
SSTEKCKRTRARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQTEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIVKESSEYKEWVKNHVRFKEGVCMVLEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=437234 HGI43_RS07360 WP_202135553.1 1533717..1535156(-) (comH) [Helicobacter pylori strain ASHA-001]
ATGAAAAAAACCCTTTGTCTGTCTTTCTTTCTGACCTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAGAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATTGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACGACCTTAAACCCTAACCGCCCTACTATTCCCAGAAACACCCAAATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGCTACACCCGCACCAAATGCCTTCTTTAAACGCGCCCATACAAAAACCACAAAACAAACCCACTCCATCGC
AACAACCTCTTCAAAACTTTTCTTACCCAGAGTCCAAACTAGACTCTAAAAACCCTAAAAACAGCCTTTTACAGCCTTTA
GCCACTCTTAATAAAACAAGCCTTGCTAATGAAGTTAAAACGCCAACAAACGACACTAAGCCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAACAACCTCTTTGTAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCCCTAACGCTGATATTA
ATGAACACAATGAAAGCAATGAGAATAGGGATAATGCGGAAAAACAAGCCATTAGAGATCCTAATATCAAAGAATTTGCG
TGCGGGAAGTGGGTCTATGATGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
GACTGCAACAGACATTACCCCTTGCGACTACAGCAACGCTGAAAATAAAAGCGGTAAAATCACTACCCCCTATACTAAAA
TCTCTGTTCAAAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAACAATTTTACCATCCTCCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGACCAGAGCACGAAAAGACGGCACGACTAGGCAATGCTATCTGATAGAAGAGCCTTT
AAAACAAGCGTGGGAGAGCGAGTATGAAATCACCACACAATTAGTGAAAGCCATTTATGAACGCCCCAAACAAGACGATC
AAACAGAGCCGACTTTCTATGAAACCAGCGAATTAGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAGTTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAGTCAAAGAAAGCAGTGA
ATACAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGTTTTAGAAATAGAAGAGCAACCACGAG
CCAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTTGTTTGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	92.902	100	0.929