Detailed information NTG0437225

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HGI43_RS01595
• Genome accession: NZ_CP051290
• Coordinates: 326714..327514 (+)
• Length: 266 a.a.
• NCBI ID: WP_202133080.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain ASHA-001
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 321714..332514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HGI43_RS01560 (HGI43_01560)	pseH	322216..322758 (+)	543	WP_202135742.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HGI43_RS01565 (HGI43_01565)	-	322691..323629 (-)	939	WP_202135743.1	tetraacyldisaccharide 4'-kinase	-
HGI43_RS01570 (HGI43_01570)	-	323626..324408 (-)	783	WP_202133077.1	NAD+ synthase	-
HGI43_RS01580 (HGI43_01580)	ilvC	324655..325647 (+)	993	WP_202133078.1	ketol-acid reductoisomerase	-
HGI43_RS01585 (HGI43_01585)	minD	325666..326472 (+)	807	WP_202133079.1	septum site-determining protein MinD	-
HGI43_RS01590 (HGI43_01590)	minE	326469..326702 (+)	234	WP_000051411.1	cell division topological specificity factor MinE	-
HGI43_RS01595 (HGI43_01595)	dprA	326714..327514 (+)	801	WP_202133080.1	DNA-processing protein DprA	Machinery gene
HGI43_RS01600 (HGI43_01600)	dprB	327511..327915 (+)	405	WP_202133081.1	Holliday junction resolvase RuvX	Machinery gene
HGI43_RS01605 (HGI43_01605)	-	328043..328831 (+)	789	WP_202135744.1	tetratricopeptide repeat protein	-
HGI43_RS01610 (HGI43_01610)	-	329027..329365 (+)	339	WP_202135745.1	hypothetical protein	-
HGI43_RS01615 (HGI43_01615)	-	329349..329915 (+)	567	WP_202133084.1	hypothetical protein	-
HGI43_RS07910 (HGI43_01620)	-	329927..330318 (+)	392	Protein_312	lysozyme	-
HGI43_RS07790	-	330339..330515 (+)	177	WP_014534379.1	hypothetical protein	-
HGI43_RS07795 (HGI43_01630)	-	330608..330793 (+)	186	WP_014534380.1	hypothetical protein	-
HGI43_RS01635 (HGI43_01635)	-	330947..331333 (+)	387	WP_202133397.1	DUF1294 domain-containing protein	-
HGI43_RS01640 (HGI43_01640)	-	331333..332118 (+)	786	WP_202135746.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29816.72 Da
• Isoelectric Point: 8.5925

>NTDB_id=437225 HGI43_RS01595 WP_202133080.1 326714..327514(+) (dprA) [Helicobacter pylori strain ASHA-001]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLAREFAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=437225 HGI43_RS01595 WP_202133080.1 326714..327514(+) (dprA) [Helicobacter pylori strain ASHA-001]
ATGAAAAGCAACTTCCAATACAGCGCACTAGAGAACATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTAGACGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGTTTGCTAAAAATGGTGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAGTATCAAAAACCCTTATTTGTTTTGCCTCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41