Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   IMZ18_RS02285 Genome accession   NZ_CP063151
Coordinates   417416..418279 (+) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis subsp. subtilis strain CMIN-4     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 412416..423279
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMZ18_RS02255 (IMZ18_02255) pncA 412882..413433 (+) 552 WP_014480709.1 isochorismatase family cysteine hydrolase -
  IMZ18_RS02260 (IMZ18_02260) pncB 413449..414921 (+) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  IMZ18_RS02265 (IMZ18_02265) pdeH 415057..416286 (+) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  IMZ18_RS02270 (IMZ18_02270) - 416262..416630 (-) 369 WP_014477834.1 hypothetical protein -
  IMZ18_RS02275 (IMZ18_02275) - 416744..416869 (-) 126 WP_003228793.1 hypothetical protein -
  IMZ18_RS02280 (IMZ18_02280) degQ 417091..417231 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  IMZ18_RS02285 (IMZ18_02285) comQ 417416..418279 (+) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  IMZ18_RS02290 (IMZ18_02290) comX 418281..418502 (+) 222 WP_014480704.1 competence pheromone ComX -
  IMZ18_RS02295 (IMZ18_02295) comP 418518..420830 (+) 2313 WP_014480703.1 sensor histidine kinase Regulator
  IMZ18_RS02300 (IMZ18_02300) comA 420911..421555 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  IMZ18_RS02305 (IMZ18_02305) yuxO 421574..421954 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  IMZ18_RS02310 (IMZ18_02310) mnhG 421993..422367 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  IMZ18_RS02315 (IMZ18_02315) mrpF 422351..422635 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  IMZ18_RS02320 (IMZ18_02320) mrpE 422635..423111 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=437185 IMZ18_RS02285 WP_014480705.1 417416..418279(+) (comQ) [Bacillus subtilis subsp. subtilis strain CMIN-4]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=437185 IMZ18_RS02285 WP_014480705.1 417416..418279(+) (comQ) [Bacillus subtilis subsp. subtilis strain CMIN-4]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439