Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HEP75_RS06010 Genome accession   NZ_CP051261
Coordinates   1428110..1428511 (+) Length   133 a.a.
NCBI ID   WP_003472648.1    Uniprot ID   A0A6N7QCN8
Organism   Xanthomonas sp. SI     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1423110..1433511
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HEP75_RS06000 (HEP75_01180) - 1426038..1426919 (-) 882 WP_185825791.1 energy transducer TonB -
  HEP75_RS06005 (HEP75_01181) gshB 1426916..1427866 (-) 951 WP_185815602.1 glutathione synthase -
  HEP75_RS06010 (HEP75_01182) pilG 1428110..1428511 (+) 402 WP_003472648.1 twitching motility response regulator PilG Regulator
  HEP75_RS06015 (HEP75_01183) - 1428529..1428891 (+) 363 WP_179566488.1 response regulator -
  HEP75_RS06020 (HEP75_01184) - 1428893..1429423 (+) 531 WP_185815603.1 chemotaxis protein CheW -
  HEP75_RS06025 (HEP75_01185) - 1429464..1431500 (+) 2037 WP_185815604.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14643.95 Da        Isoelectric Point: 6.3483

>NTDB_id=437134 HEP75_RS06010 WP_003472648.1 1428110..1428511(+) (pilG) [Xanthomonas sp. SI]
MSENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=437134 HEP75_RS06010 WP_003472648.1 1428110..1428511(+) (pilG) [Xanthomonas sp. SI]
ATGAGTGAAAACACGACTGCGGGTGGGGAACTCGCAGGACTGAGGGTCATGGTGATCGATGACTCGAAGACGATCCGCCG
TACTGCCGAAACGCTGTTGAAGCGCGAGGGATGCGAGGTGGTCACCGCCACCGACGGCTTCGAGGCCCTGGCCAAGATCG
CCGATCAGCAACCGCAGATCATCTTCGTGGACATCATGATGCCGCGGCTGGACGGCTATCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACGCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCGCGCGGGCGCAT
CGTCGGTTCCGAGCAGTACCTCACCAAACCCTTCACACGCGAAGAACTGCTGGGCGCGATCCGTACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N7QCN8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677