Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   HGD77_RS11660 Genome accession   NZ_CP051208
Coordinates   2430303..2434754 (-) Length   1483 a.a.
NCBI ID   WP_129716295.1    Uniprot ID   A0AAJ4P548
Organism   Acinetobacter sp. NEB149     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2425303..2439754
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HGD77_RS11630 (HGD77_11635) elsL 2426277..2426810 (-) 534 WP_004731981.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  HGD77_RS11635 (HGD77_11640) - 2426936..2427289 (-) 354 Protein_2255 YbaN family protein -
  HGD77_RS11640 (HGD77_11645) - 2427377..2428252 (+) 876 WP_004731985.1 DUF1853 family protein -
  HGD77_RS11645 (HGD77_11650) - 2428365..2428517 (+) 153 WP_004280704.1 entericidin A/B family lipoprotein -
  HGD77_RS11650 (HGD77_11655) dapE 2428639..2429775 (+) 1137 WP_004731987.1 succinyl-diaminopimelate desuccinylase -
  HGD77_RS11655 (HGD77_11660) - 2429841..2430299 (-) 459 WP_004731989.1 hypothetical protein -
  HGD77_RS11660 (HGD77_11665) chpA 2430303..2434754 (-) 4452 WP_129716295.1 Hpt domain-containing protein Regulator
  HGD77_RS11665 (HGD77_11670) - 2434922..2436994 (-) 2073 Protein_2261 methyl-accepting chemotaxis protein -
  HGD77_RS11675 (HGD77_11680) - 2437041..2437577 (-) 537 WP_004280709.1 chemotaxis protein CheW -
  HGD77_RS11680 (HGD77_11685) - 2437583..2437951 (-) 369 WP_004731998.1 response regulator -
  HGD77_RS11685 (HGD77_11690) pilG 2437977..2438360 (-) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  HGD77_RS11690 (HGD77_11695) - 2438646..2439293 (+) 648 WP_004732001.1 hypothetical protein -

Sequence


Protein


Download         Length: 1483 a.a.        Molecular weight: 165999.03 Da        Isoelectric Point: 4.3221

>NTDB_id=436949 HGD77_RS11660 WP_129716295.1 2430303..2434754(-) (chpA) [Acinetobacter sp. NEB149]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLSNPDHQENLKTIRRHFHTLKGSGRMVGAKSA
GEMAWAVEDTLNRVLSGSIQLTPTVQKFAQAVLNVYQYALYPKFKHVQQLDLDLRPMVLLGQQLQQQISPEPALEELLAL
ADHLTAEGQMTGLELADNEPSEVELTIAPVEVPVRSDIEETVAIFIEEAEEHLDTIATFLRTEDEKSQDYNALIRAIHTL
RGSSSMAQIEQIFEASSKVEHLFKTLLQDEIASTSKETALLIQYAEFVSDYLHLLRQGNTAKLDAVYATFERVWHDYGFA
VTETNSIQTQGLVSKLVELDIDLLLDAEFEFDKRAQVDYPEYIQALSQQAAELLAHTESRAAQGIHEFTADLKSTYDALL
EKPVLLNSDYAYELFAQAHQEFIHLFDTLAAGQRVILNDEIQKILSELSAFVQQDLEIFAEDTSNQNVELSSESTQVAET
VATGSVDFAGLSQRIAADRQQQQSTETNRDFDEELLSIFLEEADELLAGIDEDLNTWSKKQDDTTSLNNLMRHLHTLKGG
ANMIAALHIGLIAHELESIYERVIRQQIAVTPALIQIIRLVQDNVSDRIQSIREDGIDYPAPEAIAILQNIQVLVSGQAV
AAAESANTVVEVAEVQATSISEPQLEESATTEHPATDLAEAEELLEILESPEATEDIPVERSEEDELKSIVEESFLEESE
EILANAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMIDVEEVASIAYELETTFEQFAVYQFNSNAYDGLLQKTLVWL
RQAIFQHDYNGFDQLYSSLKKIAYVDVTAQLPERLAKTDNLVVSTDFGFVEGDGTEPPQMMGEWANSGTSDSNNEMIRIS
ADLVEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYS
SLNQLSKSLAESASDLVDFKSTLADKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAEL
IVQNTEGELDRNILERLVTPFEHMLRNAIDHGLEDTADRIALNKPEMGSIVLNISRQGTDVIVSFSDDGKGIDAEKIREK
AMSLDLIKADQVIDQEEILQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKSLGGHVSVSSELGKGTIFTIRVPTTVAVS
DALMVKVGDQQYAISLAQIDRIVRIAPTILESYFNSKDDYFKIDGANYKLRYLSEFVGNQPIPRLNNVGHSLPVLLIKGN
SGQTIALLVDQLVGSRAQIVVKPIGQQFANVRVVAGATILGDGQVCLILDGQNVARQIQATQRVKQLNDQRDGSRNANAR
RLVMIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHRDLPIIMI
TSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQG

Nucleotide


Download         Length: 4452 bp        

>NTDB_id=436949 HGD77_RS11660 WP_129716295.1 2430303..2434754(-) (chpA) [Acinetobacter sp. NEB149]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGATAGTTATCTTGACCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAGGAAATCGAAGAGATCTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGTTGAGCAATCCAGATC
ATCAAGAAAATCTGAAGACCATTCGCCGCCATTTTCATACCCTGAAAGGTTCAGGCCGCATGGTCGGGGCAAAATCGGCA
GGGGAAATGGCCTGGGCGGTTGAAGATACCCTAAACCGGGTTTTGTCCGGTTCGATTCAGCTAACACCGACGGTACAGAA
ATTTGCCCAAGCGGTACTGAATGTCTATCAATATGCTTTATATCCAAAATTCAAACATGTACAGCAATTGGATCTCGATC
TGCGTCCAATGGTGCTGTTGGGACAACAATTACAACAACAAATTTCGCCTGAACCTGCATTGGAAGAATTACTGGCATTG
GCAGATCATTTGACCGCTGAAGGTCAGATGACAGGTCTTGAGCTTGCAGACAATGAGCCAAGTGAAGTTGAGCTAACAAT
AGCGCCAGTAGAAGTACCGGTTCGCAGTGATATCGAAGAAACTGTGGCGATCTTTATTGAAGAAGCAGAAGAGCATCTGG
ATACGATTGCTACCTTCCTTCGCACTGAAGATGAAAAATCACAAGATTATAATGCGCTGATTCGTGCGATTCATACTTTG
CGCGGCAGTTCATCGATGGCGCAGATTGAGCAGATTTTTGAAGCCAGTTCCAAGGTGGAACATCTGTTCAAAACTTTGCT
ACAGGATGAAATTGCTTCTACTTCAAAAGAAACTGCTTTGCTGATTCAGTATGCGGAGTTCGTGAGTGACTATCTGCACC
TGCTACGTCAGGGCAATACTGCAAAACTGGATGCGGTATACGCCACCTTTGAGCGTGTCTGGCATGATTATGGCTTTGCA
GTTACTGAAACCAATAGCATTCAGACGCAAGGCTTGGTGTCCAAACTGGTTGAGCTGGATATTGATCTGTTATTGGATGC
CGAGTTTGAATTTGATAAACGCGCCCAAGTCGATTATCCGGAATATATTCAGGCACTCAGCCAGCAGGCTGCAGAATTGC
TAGCACATACAGAAAGCCGGGCAGCGCAGGGAATTCATGAATTCACTGCCGATCTGAAATCGACTTATGATGCGCTGCTT
GAAAAGCCAGTACTGCTAAATAGCGATTATGCCTATGAATTGTTCGCACAGGCGCACCAGGAATTTATTCATTTATTTGA
TACCTTGGCCGCAGGACAGCGCGTCATTCTGAATGATGAGATTCAAAAAATACTCAGTGAACTGTCTGCATTTGTGCAGC
AGGATCTCGAGATATTTGCTGAAGATACTAGCAATCAGAATGTTGAGCTAAGCTCAGAGAGCACACAGGTGGCTGAAACT
GTCGCGACTGGTAGTGTGGATTTTGCTGGTTTGAGCCAACGTATCGCTGCGGATCGTCAACAGCAGCAAAGTACTGAAAC
CAACCGTGATTTTGATGAAGAATTATTAAGTATCTTCCTGGAAGAAGCGGATGAATTGCTGGCAGGGATTGATGAAGATC
TGAATACCTGGAGTAAAAAACAGGACGATACAACCTCACTGAACAATCTGATGCGTCATTTGCATACCTTAAAAGGTGGT
GCAAACATGATTGCAGCTTTGCATATCGGTTTGATTGCACATGAACTGGAAAGTATTTATGAGCGGGTGATCCGTCAGCA
AATTGCCGTGACACCTGCTTTAATCCAGATTATTCGTCTGGTTCAGGATAACGTTTCCGATCGTATTCAATCCATTCGAG
AAGACGGTATTGATTATCCTGCACCAGAAGCGATTGCGATTCTGCAAAATATTCAGGTGCTGGTGTCTGGACAAGCTGTT
GCTGCTGCGGAGAGCGCGAATACTGTAGTTGAAGTTGCAGAGGTCCAAGCGACATCAATTTCTGAGCCGCAACTTGAAGA
GTCAGCAACGACTGAACATCCTGCAACTGATCTGGCAGAAGCTGAAGAATTACTGGAAATCTTGGAATCTCCTGAGGCTA
CTGAAGACATACCAGTAGAACGTTCTGAAGAAGACGAACTGAAATCGATTGTTGAAGAATCTTTCTTGGAAGAATCCGAA
GAGATTCTGGCGAATGCCGAGAAGCTCCTCAATCAATGGTTTGATCAGCGTAGTGACCGTAGTTTATTGCTGCAATTACA
GCGTGCTGCCCATAGTATCAAGGGTGGCGCACGTATGATTGATGTTGAAGAAGTGGCCAGTATTGCCTATGAGCTGGAAA
CGACTTTCGAACAGTTTGCGGTCTACCAATTTAACTCGAATGCTTATGATGGCTTATTGCAGAAAACGCTGGTTTGGTTA
AGACAGGCGATTTTCCAGCATGACTATAACGGTTTTGATCAGCTGTACAGCAGTCTGAAAAAGATTGCTTATGTGGACGT
TACTGCGCAATTGCCTGAGCGTCTGGCGAAAACAGATAATCTGGTGGTCAGCACCGACTTCGGCTTTGTTGAAGGTGATG
GTACTGAACCGCCACAGATGATGGGTGAGTGGGCGAATAGCGGCACCAGCGATAGCAATAACGAGATGATCCGTATCTCT
GCTGATCTGGTCGAGAAGATGATTGACCTGTCCGGTGAGAACTCGATTAACCGTTCGCGTATCGAGATGGACCTAGGGCA
GCTTGGCAATACCTTGAACGAGATGGAATTGGCGATCAAGCGTCTTGCTGATCAGTTACGTCGAATGGAAGGCGAGCTGG
AATCACAGATTATTGCCAAACATGGTTCAGAGAACTCGCGCTATGCCGACTTTGACCCGCTGGAAATGGACCAATATTCC
TCTCTAAACCAGCTGTCCAAATCACTGGCAGAATCTGCATCAGATTTGGTCGACTTCAAGAGTACCTTAGCCGACAAGAT
TCGCGAAACCGAAGGACTGTTATTGCAACAATCCCGTATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACCCGTCTGG
TCCCATTTGACCGGATGTTGCCGCGTTTACAGCGTATTGTGCGTCAAACCTCGACCACCTTGAACCGTCCTGCAGAACTG
ATCGTACAGAATACCGAAGGTGAACTGGATCGTAACATTCTCGAGCGTCTGGTCACACCATTTGAGCATATGCTGCGTAA
CGCGATTGACCATGGTCTGGAAGATACTGCAGATCGTATCGCACTGAACAAGCCGGAAATGGGTTCGATTGTCTTGAACA
TCAGTCGTCAGGGAACCGATGTAATCGTGTCCTTTAGTGATGATGGTAAGGGGATCGATGCGGAGAAGATTCGTGAAAAA
GCGATGAGTCTGGATCTGATCAAAGCGGATCAAGTTATTGATCAGGAAGAAATCCTGCAATTTATCTTCCATCCTGGTTT
CAGTACCGCGAAAGCAGTGACCCAGATTTCTGGTCGTGGTGTCGGTCTGGACGTGGTGCAAAGTGAAATCAAATCTCTTG
GCGGCCATGTGTCAGTAAGCTCGGAACTAGGCAAGGGCACCATCTTTACGATTCGCGTACCGACGACCGTGGCGGTCAGC
GATGCCTTGATGGTGAAAGTGGGCGATCAGCAATATGCGATTTCACTGGCGCAGATTGACCGAATTGTACGTATTGCGCC
GACTATATTGGAAAGCTATTTCAACAGTAAAGATGACTATTTCAAGATCGATGGCGCAAACTATAAGCTGCGTTATCTGT
CTGAGTTTGTTGGCAACCAGCCAATTCCACGTCTGAATAATGTTGGGCATTCATTGCCGGTGCTGTTGATCAAAGGAAAT
AGTGGTCAGACCATTGCCTTACTGGTCGATCAGCTGGTCGGTTCTCGAGCGCAGATTGTGGTGAAACCGATTGGACAGCA
GTTTGCCAATGTCAGAGTGGTGGCCGGTGCTACGATTTTGGGTGATGGTCAGGTCTGTCTGATTCTCGATGGACAGAATG
TTGCCCGTCAGATTCAGGCGACACAGCGTGTCAAACAGCTCAATGATCAGCGTGATGGTTCGCGTAATGCAAATGCACGT
CGTCTGGTAATGATTGTCGATGACTCGGTAACTGTACGTAAAGTGACGTCGCGTCTGCTTGAACGTCAAGGCTATGATAT
TGTGACTGCCAAAGATGGTGTGGATGCGATCGAGCAGCTTGAAAACGTCAGACCGGATCTGATGTTGCTGGATATCGAAA
TGCCGCGCATGGACGGTTTCGAAGTGACCAATCTGGTTCGTCACCATGATATTCACCGTGACTTGCCGATTATCATGATT
ACCTCACGTACCGGTGAGAAGCATCGTGAACGTGCATTCAGCTTGGGCGTAACGCACTATATGGGTAAACCGTTCCAGGA
AGCGGAGCTGCTGGCCAATATCCAGCAACTGATTGCTGAAAAACAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.284

100

0.624