Detailed information NTG0043684

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LP12_RS13325
• Genome accession: NC_016811
• Coordinates: 2977612..2978679 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila ATCC 43290
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2972612..2983679

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP12_RS13300 (lp12_2658)	-	2972903..2973619 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
LP12_RS13305 (lp12_2659)	-	2973901..2974767 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
LP12_RS13310 (lp12_2660)	rpoH	2974901..2975755 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
LP12_RS13315 (lp12_2661)	ftsX	2976052..2976981 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
LP12_RS13320 (lp12_2662)	ftsE	2976975..2977625 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
LP12_RS13325 (lp12_2663)	pilA	2977612..2978679 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
LP12_RS13330 (lp12_2664)	-	2978742..2980067 (+)	1326	WP_010948371.1	M16 family metallopeptidase	-
LP12_RS13335 (lp12_2665)	-	2980064..2981368 (+)	1305	WP_010948372.1	M16 family metallopeptidase	-
LP12_RS13340 (lp12_2666)	rsmD	2981365..2981910 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LP12_RS13345 (lp12_2667)	dotD	2981985..2982476 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
LP12_RS13350 (lp12_2668)	dotC	2982457..2983368 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=43684 LP12_RS13325 WP_015443981.1 2977612..2978679(-) (pilA) [Legionella pneumophila subsp. pneumophila ATCC 43290]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=43684 LP12_RS13325 WP_015443981.1 2977612..2978679(-) (pilA) [Legionella pneumophila subsp. pneumophila ATCC 43290]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501