Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   HF084_RS00465 Genome accession   NZ_CP051191
Coordinates   84010..85053 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain NGA102     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 79010..90053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HF084_RS00435 (HF084_10220) - 79436..79546 (+) 111 WP_001790257.1 hypothetical protein -
  HF084_RS00440 (HF084_10215) - 79575..79988 (+) 414 WP_001670387.1 hypothetical protein -
  HF084_RS00445 (HF084_10210) - 80419..81405 (-) 987 WP_000999716.1 aromatic acid exporter family protein -
  HF084_RS00450 (HF084_10205) map 81936..82694 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  HF084_RS00455 (HF084_10200) - 82911..83297 (+) 387 WP_001110179.1 hypothetical protein -
  HF084_RS00460 (HF084_10195) liaF 83312..84013 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  HF084_RS00465 (HF084_10190) vraS 84010..85053 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  HF084_RS00470 (HF084_10185) vraR 85043..85672 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  HF084_RS00475 (HF084_10180) - 85788..87005 (-) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  HF084_RS00480 (HF084_10175) - 87283..87558 (-) 276 WP_000428171.1 hypothetical protein -
  HF084_RS00485 (HF084_10170) - 87565..88029 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  HF084_RS00490 (HF084_10165) - 88176..88376 (+) 201 WP_000180460.1 DUF1128 family protein -
  HF084_RS00495 (HF084_10160) - 88379..89635 (+) 1257 WP_001789555.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=436766 HF084_RS00465 WP_001017131.1 84010..85053(+) (vraS) [Staphylococcus aureus strain NGA102]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=436766 HF084_RS00465 WP_001017131.1 84010..85053(+) (vraS) [Staphylococcus aureus strain NGA102]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAGTTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1