Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | LP12_RS09620 | Genome accession | NC_016811 |
| Coordinates | 2153508..2153822 (-) | Length | 104 a.a. |
| NCBI ID | WP_010947713.1 | Uniprot ID | Q5ZU11 |
| Organism | Legionella pneumophila subsp. pneumophila ATCC 43290 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2148508..2158822
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP12_RS09595 (lp12_1932) | - | 2148937..2149437 (-) | 501 | WP_015444348.1 | hypothetical protein | - |
| LP12_RS09600 (lp12_1933) | - | 2149929..2150789 (+) | 861 | WP_015444347.1 | polysaccharide deacetylase family protein | - |
| LP12_RS09605 (lp12_1934) | - | 2150906..2152099 (-) | 1194 | WP_010947710.1 | murein transglycosylase A | - |
| LP12_RS09610 (lp12_1935) | lpp1976 | 2152209..2152766 (-) | 558 | WP_010947711.1 | hypothetical protein | Machinery gene |
| LP12_RS09615 (lp12_1936) | lpp1977 | 2152763..2153569 (-) | 807 | WP_010947712.1 | PilW family protein | Machinery gene |
| LP12_RS09620 (lp12_1937) | lpp1978 | 2153508..2153822 (-) | 315 | WP_010947713.1 | type IV pilus modification PilV family protein | Machinery gene |
| LP12_RS09625 (lp12_1938) | hisC | 2153982..2155091 (+) | 1110 | WP_015444344.1 | histidinol-phosphate transaminase | - |
| LP12_RS09630 (lp12_1939) | - | 2155128..2155469 (+) | 342 | WP_010947715.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| LP12_RS09635 (lp12_1940) | secF | 2155642..2156559 (-) | 918 | WP_010947716.1 | protein translocase subunit SecF | - |
| LP12_RS09640 (lp12_1941) | secD | 2156572..2158428 (-) | 1857 | WP_010947717.1 | protein translocase subunit SecD | - |
| LP12_RS09645 (lp12_1942) | yajC | 2158450..2158785 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12330.42 Da Isoelectric Point: 9.4609
>NTDB_id=43676 LP12_RS09620 WP_010947713.1 2153508..2153822(-) (lpp1978) [Legionella pneumophila subsp. pneumophila ATCC 43290]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEALYISENRLPLPPSNYHFDIRRSQK
KIILNVTWFKKSQSIIRSYDLDAH
Nucleotide
Download Length: 315 bp
>NTDB_id=43676 LP12_RS09620 WP_010947713.1 2153508..2153822(-) (lpp1978) [Legionella pneumophila subsp. pneumophila ATCC 43290]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTAG
ATGAAGCATTATATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGAGATCTCAAAAG
AAAATCATTTTGAATGTTACGTGGTTTAAAAAAAGCCAGTCAATTATTCGCTCCTATGATCTGGATGCTCATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
96.154 |
100 |
0.962 |
| lpp1978 | Legionella pneumophila str. Paris |
94.231 |
100 |
0.942 |