Detailed information NTG0436590

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HF907_RS15490
• Genome accession: NZ_CP051173
• Coordinates: 3349069..3350208 (+)
• Length: 379 a.a.
• NCBI ID: WP_028860160.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain UW763
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3344069..3355208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HF907_RS15465 (HF907_15525)	-	3344431..3344679 (-)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HF907_RS15470 (HF907_15530)	coaD	3344730..3345236 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
HF907_RS15475 (HF907_15535)	rsmD	3345432..3346079 (-)	648	WP_011000352.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HF907_RS15480 (HF907_15540)	-	3346160..3347503 (-)	1344	WP_011000351.1	M16 family metallopeptidase	-
HF907_RS15485 (HF907_15545)	-	3347503..3349008 (-)	1506	WP_011000350.1	M16 family metallopeptidase	-
HF907_RS15490 (HF907_15550)	pilA	3349069..3350208 (+)	1140	WP_028860160.1	signal recognition particle-docking protein FtsY	Machinery gene
HF907_RS15495 (HF907_15555)	-	3350205..3350843 (-)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
HF907_RS15500 (HF907_15560)	maiA	3350840..3351490 (-)	651	WP_011000347.1	maleylacetoacetate isomerase	-
HF907_RS15505 (HF907_15565)	-	3351494..3352195 (-)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
HF907_RS15510 (HF907_15570)	-	3352343..3352969 (+)	627	WP_038938076.1	ANTAR domain-containing response regulator	-
HF907_RS15515 (HF907_15575)	-	3353246..3354508 (+)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40141.37 Da
• Isoelectric Point: 5.8101

>NTDB_id=436590 HF907_RS15490 WP_028860160.1 3349069..3350208(+) (pilA) [Ralstonia pseudosolanacearum strain UW763]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=436590 HF907_RS15490 WP_028860160.1 3349069..3350208(+) (pilA) [Ralstonia pseudosolanacearum strain UW763]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTTCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.573