Detailed information NTG0436548

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: HF909_RS16040
• Genome accession: NZ_CP051169
• Coordinates: 3319283..3320422 (+)
• Length: 379 a.a.
• NCBI ID: WP_193026599.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain RUN2474
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3314283..3325422

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HF909_RS16015 (HF909_16115)	-	3314639..3314887 (-)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-
HF909_RS16020 (HF909_16120)	coaD	3314938..3315444 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
HF909_RS16025 (HF909_16125)	rsmD	3315640..3316287 (-)	648	WP_193026596.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HF909_RS16030 (HF909_16130)	-	3316368..3317711 (-)	1344	WP_193026597.1	M16 family metallopeptidase	-
HF909_RS16035 (HF909_16135)	-	3317711..3319222 (-)	1512	WP_193026598.1	M16 family metallopeptidase	-
HF909_RS16040 (HF909_16140)	pilA	3319283..3320422 (+)	1140	WP_193026599.1	signal recognition particle-docking protein FtsY	Machinery gene
HF909_RS16045 (HF909_16145)	-	3320419..3321057 (-)	639	WP_193035156.1	LysE/ArgO family amino acid transporter	-
HF909_RS16050 (HF909_16150)	maiA	3321054..3321704 (-)	651	WP_193026600.1	maleylacetoacetate isomerase	-
HF909_RS16055 (HF909_16155)	-	3321708..3322409 (-)	702	WP_064050376.1	fumarylacetoacetate hydrolase family protein	-
HF909_RS16060 (HF909_16160)	-	3322557..3323183 (+)	627	WP_193026601.1	ANTAR domain-containing response regulator	-
HF909_RS16065 (HF909_16165)	-	3323460..3324722 (+)	1263	WP_193035158.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40171.39 Da
• Isoelectric Point: 5.8101

>NTDB_id=436548 HF909_RS16040 WP_193026599.1 3319283..3320422(+) (pilA) [Ralstonia pseudosolanacearum strain RUN2474]
MFSFWKKRKAEPQPAAEPAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DTLGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=436548 HF909_RS16040 WP_193026599.1 3319283..3320422(+) (pilA) [Ralstonia pseudosolanacearum strain RUN2474]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACCGGCGCCGCCCGCCGCCGCACCCGAAGC
CGCACAGGCTCCTGCCCCGGCCCCAGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCGCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGACGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCACGCAAGGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGTGTCGATGCCACCGAATACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCGCAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGTGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAGGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATACGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTACCGGTGTATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAGTTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.923	100	0.57