Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HCM98_RS05955 Genome accession   NZ_CP051013
Coordinates   1140518..1140694 (+) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus tropicus strain LM1212-DB     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1135518..1145694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCM98_RS05935 (HCM98_05940) clpB 1135851..1138451 (+) 2601 WP_029437834.1 ATP-dependent chaperone ClpB -
  HCM98_RS05940 (HCM98_05945) - 1138489..1138671 (-) 183 WP_001211116.1 YjzD family protein -
  HCM98_RS05945 (HCM98_05950) - 1138828..1139562 (+) 735 WP_029437835.1 hydrolase -
  HCM98_RS05950 (HCM98_05955) - 1139592..1140464 (+) 873 WP_029437836.1 NAD(P)-dependent oxidoreductase -
  HCM98_RS05955 (HCM98_05960) comZ 1140518..1140694 (+) 177 WP_009879752.1 ComZ family protein Regulator
  HCM98_RS05960 (HCM98_05965) fabH 1141094..1142026 (+) 933 WP_001100541.1 beta-ketoacyl-ACP synthase III -
  HCM98_RS05965 (HCM98_05970) fabF 1142058..1143296 (+) 1239 WP_000412652.1 beta-ketoacyl-ACP synthase II -
  HCM98_RS05970 (HCM98_05975) - 1143403..1144191 (+) 789 WP_029437837.1 DUF2268 domain-containing putative Zn-dependent protease -
  HCM98_RS05975 (HCM98_05980) - 1144335..1145081 (+) 747 WP_029437838.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=436056 HCM98_RS05955 WP_009879752.1 1140518..1140694(+) (comZ) [Bacillus tropicus strain LM1212-DB]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=436056 HCM98_RS05955 WP_009879752.1 1140518..1140694(+) (comZ) [Bacillus tropicus strain LM1212-DB]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCCGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCTCAACCAGTATTAGAATTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGAA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586