Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IL989_RS18700 Genome accession   NZ_CP062984
Coordinates   3784240..3785034 (-) Length   264 a.a.
NCBI ID   WP_013354215.1    Uniprot ID   A0A9P1JLP7
Organism   Bacillus amyloliquefaciens strain PP19 isolate PP19     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3779240..3790034
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IL989_RS18680 (IL989_18680) - 3779366..3780784 (-) 1419 WP_193351146.1 cell wall metabolism sensor histidine kinase WalK -
  IL989_RS18685 (IL989_18685) - 3780781..3781464 (-) 684 WP_065522061.1 response regulator transcription factor -
  IL989_RS18690 (IL989_18690) - 3781678..3782589 (+) 912 WP_193351147.1 PepSY domain-containing protein -
  IL989_RS18695 (IL989_18695) htrA 3782957..3784153 (-) 1197 WP_193351148.1 S1C family serine protease Regulator
  IL989_RS18700 (IL989_18700) vicX 3784240..3785034 (-) 795 WP_013354215.1 MBL fold metallo-hydrolase Regulator
  IL989_RS18705 (IL989_18705) - 3785050..3785889 (-) 840 WP_014472401.1 two-component system regulatory protein YycI -
  IL989_RS18710 (IL989_18710) yycH 3785876..3787234 (-) 1359 WP_088613773.1 two-component system activity regulator YycH -
  IL989_RS18715 (IL989_18715) walK 3787224..3789059 (-) 1836 WP_014471295.1 cell wall metabolism sensor histidine kinase WalK -
  IL989_RS18720 (IL989_18720) walR 3789066..3789773 (-) 708 WP_004393104.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29116.16 Da        Isoelectric Point: 5.7992

>NTDB_id=436014 IL989_RS18700 WP_013354215.1 3784240..3785034(-) (vicX) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
MGLQFSVLASGSTGNAFYLETEEHSFLVDAGLSGKAMDGLMEQIGRKIDDVDGIFVTHEHSDHIKGLGVIARKYGLPVYA
NEKTWKAMENQIGKLDTGQKFLFPMESVKSFGGLDVESFGVSHDAAEPMFYVFHYQGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDGTSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFVAGETFQLFDTDPKIPTPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=436014 IL989_RS18700 WP_013354215.1 3784240..3785034(-) (vicX) [Bacillus amyloliquefaciens strain PP19 isolate PP19]
ATGGGCTTGCAATTTAGCGTGCTTGCGAGCGGGAGTACCGGAAACGCGTTTTATCTGGAGACAGAGGAGCACTCCTTTCT
GGTGGATGCCGGCCTGAGCGGAAAAGCGATGGACGGGCTGATGGAGCAAATCGGCCGTAAGATAGACGACGTGGACGGCA
TCTTTGTCACTCATGAGCACAGCGACCATATTAAAGGGCTCGGCGTCATTGCGAGAAAGTACGGTCTTCCGGTATACGCC
AATGAAAAGACGTGGAAAGCGATGGAGAATCAGATCGGCAAGCTGGACACCGGACAAAAGTTTTTGTTCCCGATGGAAAG
CGTGAAATCCTTCGGCGGGCTTGATGTTGAGTCATTCGGCGTCTCTCATGACGCGGCCGAGCCGATGTTCTATGTTTTCC
ATTACCAAGGCAGAAAGCTCGCGCTGATGACGGACACCGGTTATGTGAGCGACAGAATGAAGGGCATTATCCGTTCGGCC
AATGTGTTTGTGTTTGAAAGCAACCATGACGTCGGCATGCTGCAAATGGGCAGATACCCATGGAGCATTAAACGGCGGAT
TTTAAGCGATGTCGGCCACGTCTCAAATGAAGACGCGGCGCTCGCCATGACTGATGTCATCGGCGACGGCACATCACGCA
TCTACTTGGCGCATCTGAGCCAAGACAACAATATGAAGGAACTGGCGAGAATGTCCGTGCAGCAGACATTGGCTGCGAAA
GGATTTGTCGCGGGGGAAACGTTTCAATTATTTGATACCGATCCGAAAATCCCGACGCCGCTGTGCGCCGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9P1JLP7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

52.852

99.621

0.527