Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   HEQ83_RS07025 Genome accession   NZ_CP051011
Coordinates   1353741..1354205 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain BY6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348741..1359205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HEQ83_RS07005 - 1349220..1351040 (+) 1821 WP_069473380.1 PAS domain-containing protein -
  HEQ83_RS07010 - 1351016..1352235 (-) 1220 Protein_1327 aminotransferase A -
  HEQ83_RS07015 - 1352437..1352598 (-) 162 WP_007409608.1 hypothetical protein -
  HEQ83_RS07020 cheV 1352787..1353698 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  HEQ83_RS07025 kre 1353741..1354205 (-) 465 WP_003154622.1 YkyB family protein Regulator
  HEQ83_RS07030 - 1354328..1355620 (-) 1293 WP_069473381.1 MFS transporter -
  HEQ83_RS07035 - 1355696..1356190 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  HEQ83_RS07040 - 1356265..1357128 (-) 864 WP_069473382.1 metallophosphoesterase -
  HEQ83_RS07045 fadH 1357272..1358036 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  HEQ83_RS19360 - 1358147..1358692 (+) 546 Protein_1335 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=435999 HEQ83_RS07025 WP_003154622.1 1353741..1354205(-) (kre) [Bacillus velezensis strain BY6]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=435999 HEQ83_RS07025 WP_003154622.1 1353741..1354205(-) (kre) [Bacillus velezensis strain BY6]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929