Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HEQ83_RS04215 Genome accession   NZ_CP051011
Coordinates   831517..832308 (+) Length   263 a.a.
NCBI ID   WP_168237125.1    Uniprot ID   -
Organism   Bacillus velezensis strain BY6     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 826517..837308
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HEQ83_RS04190 - 828512..829396 (+) 885 WP_032857466.1 PhzF family phenazine biosynthesis isomerase -
  HEQ83_RS04195 - 829473..830057 (+) 585 WP_007408549.1 nitroreductase family protein -
  HEQ83_RS04200 - 830096..830287 (-) 192 WP_003155508.1 YfhD family protein -
  HEQ83_RS04205 - 830358..830468 (-) 111 WP_003155504.1 YfhE family protein -
  HEQ83_RS04210 - 830526..831425 (-) 900 WP_014304657.1 TIGR01777 family oxidoreductase -
  HEQ83_RS04215 recX 831517..832308 (+) 792 WP_168237125.1 recombination regulator RecX Regulator
  HEQ83_RS04220 - 832315..832626 (+) 312 WP_003155501.1 YfhH family protein -
  HEQ83_RS04225 - 832773..833966 (+) 1194 WP_025650229.1 MFS transporter -
  HEQ83_RS04230 - 834006..834395 (-) 390 WP_024085032.1 DUF2606 family protein -
  HEQ83_RS04235 - 834358..835269 (-) 912 WP_003155497.1 trypsin-like serine peptidase -
  HEQ83_RS04240 - 835415..835567 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  HEQ83_RS04245 - 835691..835960 (+) 270 WP_003155492.1 YfhJ family protein -
  HEQ83_RS04250 - 836092..836619 (+) 528 WP_046559435.1 SH3 domain-containing protein -
  HEQ83_RS04255 - 836705..837040 (+) 336 WP_032857470.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 31010.27 Da        Isoelectric Point: 6.5190

>NTDB_id=435983 HEQ83_RS04215 WP_168237125.1 831517..832308(+) (recX) [Bacillus velezensis strain BY6]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYRYLNFKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=435983 HEQ83_RS04215 WP_168237125.1 831517..832308(+) (recX) [Bacillus velezensis strain BY6]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGATGCCGACGTGCTTGTGCGTTTTGACCTGAAAAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGTGATGACGTGAAAAAAGCCTTTAACCGCGCCGTAGAATTTCTATCATATCGGATGCGGTCTGAAAAAGAAGTC
CGGGATCACCTGAAGAAAAAAGAAACACCGGACATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACCGCTACTT
AAATTTCAAAGAATTTGCCGAAGCCTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAGATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAGCAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGCTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

78.707

100

0.787