Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   GRB95_RS02165 Genome accession   NZ_CP051004
Coordinates   384188..384913 (+) Length   241 a.a.
NCBI ID   WP_000912314.1    Uniprot ID   A0AAW6XYE4
Organism   Streptococcus agalactiae 515     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 379188..389913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GRB95_RS02130 (GRB95_02130) tsaE 379990..380433 (+) 444 WP_000500161.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  GRB95_RS02135 (GRB95_02135) - 380426..380947 (+) 522 WP_000043149.1 GNAT family N-acetyltransferase -
  GRB95_RS02140 (GRB95_02140) - 380956..382263 (+) 1308 WP_000708161.1 LCP family protein -
  GRB95_RS02145 (GRB95_02145) - 382327..382623 (-) 297 WP_000690175.1 hypothetical protein -
  GRB95_RS02150 (GRB95_02150) - 382620..383039 (-) 420 WP_000368099.1 HIT family protein -
  GRB95_RS02155 (GRB95_02155) - 383375..383878 (+) 504 WP_000773458.1 hypothetical protein -
  GRB95_RS02160 (GRB95_02160) - 383930..384116 (-) 187 Protein_353 hypothetical protein -
  GRB95_RS02165 (GRB95_02165) pptA 384188..384913 (+) 726 WP_000912314.1 ABC transporter ATP-binding protein Regulator
  GRB95_RS02170 (GRB95_02170) - 384915..385949 (+) 1035 WP_000732715.1 ABC transporter permease -
  GRB95_RS02175 (GRB95_02175) - 386007..386807 (+) 801 WP_000155919.1 phosphotransferase family protein -
  GRB95_RS02180 (GRB95_02180) trmB 386797..387432 (+) 636 WP_001266024.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  GRB95_RS02190 (GRB95_02190) rimP 387921..388397 (+) 477 WP_041971671.1 ribosome maturation factor RimP -
  GRB95_RS02195 (GRB95_02195) nusA 388433..389584 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  GRB95_RS02200 (GRB95_02200) - 389606..389902 (+) 297 WP_001140526.1 YlxR family protein -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26834.27 Da        Isoelectric Point: 4.6310

>NTDB_id=435890 GRB95_RS02165 WP_000912314.1 384188..384913(+) (pptA) [Streptococcus agalactiae 515]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEANQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=435890 GRB95_RS02165 WP_000912314.1 384188..384913(+) (pptA) [Streptococcus agalactiae 515]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACCATTGATGGCATTAGTCTTGAAGCCAACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAGACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.406

99.17

0.768
  pptA Streptococcus salivarius strain HSISS4

76.987

99.17

0.763