Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   IMO23_RS15725 Genome accession   NZ_CP062919
Coordinates   3256162..3257046 (-) Length   294 a.a.
NCBI ID   WP_000914774.1    Uniprot ID   A0A0D5YE91
Organism   Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3251162..3262046
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IMO23_RS15710 (IMO23_15710) miaB 3253009..3254460 (+) 1452 WP_000218141.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  IMO23_RS15715 (IMO23_15715) - 3254498..3255586 (+) 1089 WP_000122983.1 PhoH family protein -
  IMO23_RS15720 (IMO23_15720) ybeY 3255596..3256072 (+) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  IMO23_RS15725 (IMO23_15725) tonB2 3256162..3257046 (-) 885 WP_000914774.1 energy transducer TonB Machinery gene
  IMO23_RS15730 (IMO23_15730) - 3257277..3257948 (+) 672 WP_001193958.1 hypothetical protein -
  IMO23_RS15735 (IMO23_15735) - 3258106..3258819 (+) 714 WP_000201548.1 DUF3108 domain-containing protein -
  IMO23_RS15740 (IMO23_15740) - 3258892..3259467 (+) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  IMO23_RS15745 (IMO23_15745) wrbA 3259520..3260113 (-) 594 WP_001183347.1 NAD(P)H:quinone oxidoreductase -
  IMO23_RS15750 (IMO23_15750) - 3260401..3261648 (+) 1248 WP_000893466.1 YihY family inner membrane protein -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33622.48 Da        Isoelectric Point: 9.0935

>NTDB_id=435848 IMO23_RS15725 WP_000914774.1 3256162..3257046(-) (tonB2) [Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPTEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=435848 IMO23_RS15725 WP_000914774.1 3256162..3257046(-) (tonB2) [Acinetobacter baumannii strain Res13-Abat-PEA21-P4-01-A]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTGTGTTGCTCATCCATTTTGCGATGCCTGCGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTACTGAAGATGTAATCAAGCATGCAGACTTTTTAGCCCAAGCTGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAGTGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAGATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCAGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCGGAACTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTGAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterProScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D5YE91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

100

100

1