Detailed information NTG0435799

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FOB43_RS11350
• Genome accession: NZ_CP050992
• Coordinates: 2387576..2388703 (-)
• Length: 375 a.a.
• NCBI ID: WP_043614018.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain FDAARGOS_635
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2382576..2393703

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB43_RS11330 (FOB43_11330)	-	2383089..2384873 (+)	1785	WP_168227765.1	O-antigen ligase family protein	-
FOB43_RS11335 (FOB43_11335)	rpoH	2384965..2385828 (-)	864	WP_011137752.1	RNA polymerase sigma factor RpoH	-
FOB43_RS11340 (FOB43_11340)	ftsX	2385957..2386865 (-)	909	WP_011137751.1	permease-like cell division protein FtsX	-
FOB43_RS11345 (FOB43_11345)	ftsE	2386862..2387515 (-)	654	WP_011137750.1	cell division ATP-binding protein FtsE	-
FOB43_RS11350 (FOB43_11350)	pilA	2387576..2388703 (-)	1128	WP_043614018.1	signal recognition particle-docking protein FtsY	Machinery gene
FOB43_RS11355 (FOB43_11355)	rsmD	2388940..2389494 (+)	555	WP_043614015.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FOB43_RS11360 (FOB43_11360)	-	2389604..2389855 (+)	252	WP_011137747.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FOB43_RS11380 (FOB43_11380)	tuf	2390345..2391535 (+)	1191	WP_011137735.1	elongation factor Tu	-
FOB43_RS11390 (FOB43_11390)	secE	2391686..2392042 (+)	357	WP_011137746.1	preprotein translocase subunit SecE	-
FOB43_RS11395 (FOB43_11395)	nusG	2392042..2392575 (+)	534	WP_011137745.1	transcription termination/antitermination protein NusG	-
FOB43_RS11400 (FOB43_11400)	rplK	2392676..2393107 (+)	432	WP_011137744.1	50S ribosomal protein L11	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 40007.17 Da
• Isoelectric Point: 5.1869

>NTDB_id=435799 FOB43_RS11350 WP_043614018.1 2387576..2388703(-) (pilA) [Chromobacterium violaceum strain FDAARGOS_635]
MFSFFKKKTKPAETPQIETPAPLAPEQAPAAPETIAPVPEPQREPVAAPIAETAPASAEAAVAAIPDEPVPLKKMSWTER
LKAGLAKTRDKLGKQLAGLFGGGKIDEDLYEELETVLLTADMGMDATVHLLQDVRERVSLKGLKDSSELKGALKDSLQDL
IGPLEVPLNVEGKKPFVIMMTGVNGAGKTTSIGKLAKYYQSQGKSVLLAAGDTFRAAAREQLIAWGERNNVTVIAQQGGD
SAAVCYDAIQAAIARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEVVLVLDANIGQNTVNQVKAFDDALG
LTGLILTKLDGTAKGGVIAAIAKQRPIPLRFVGVGESIDDLRPFDSRDYIDALFE

Nucleotide

• Length: 1128 bp

>NTDB_id=435799 FOB43_RS11350 WP_043614018.1 2387576..2388703(-) (pilA) [Chromobacterium violaceum strain FDAARGOS_635]
ATGTTTAGCTTCTTCAAGAAAAAGACCAAGCCGGCCGAAACGCCGCAGATCGAAACACCGGCGCCGCTCGCGCCGGAACA
GGCGCCCGCCGCGCCGGAGACCATCGCCCCCGTCCCGGAGCCGCAGCGCGAGCCCGTCGCCGCCCCCATCGCGGAAACAG
CCCCCGCCTCTGCTGAGGCCGCCGTTGCGGCCATCCCGGACGAGCCCGTGCCCCTGAAGAAAATGAGCTGGACCGAGCGG
CTGAAGGCAGGCCTGGCCAAAACCCGCGACAAGCTGGGCAAGCAGCTGGCCGGCCTGTTCGGCGGCGGCAAGATCGACGA
AGACCTGTACGAGGAACTGGAGACGGTGCTGCTGACCGCCGACATGGGCATGGACGCCACCGTGCACCTGCTGCAGGACG
TGCGCGAGCGGGTATCGCTGAAGGGGCTGAAAGATTCGTCCGAATTGAAGGGTGCGCTGAAGGATTCGCTTCAGGATCTG
ATCGGCCCGCTGGAAGTGCCGCTGAACGTGGAAGGCAAGAAGCCGTTCGTGATCATGATGACCGGCGTCAACGGCGCCGG
CAAGACCACCTCCATCGGCAAGCTGGCCAAGTATTACCAGAGCCAGGGCAAAAGCGTGCTGCTGGCCGCCGGCGACACCT
TCCGCGCCGCCGCGCGCGAGCAGCTGATCGCCTGGGGCGAGCGCAACAACGTCACCGTGATCGCGCAGCAAGGCGGCGAC
TCCGCCGCCGTCTGCTATGACGCGATCCAGGCCGCCATCGCCCGCGGCATCGACATCGTGCTGGCCGACACCGCGGGCCG
CCTGCCGACCCAGCTGCACCTGATGGAAGAGATCAAGAAGGTGAAGCGCGTGATCCAGAAGGCGCTGCCGGACGCGCCGC
ACGAGGTGGTACTGGTGCTGGACGCCAATATCGGCCAGAACACCGTCAATCAGGTGAAGGCCTTCGACGACGCGCTGGGC
CTGACCGGCCTGATCCTGACCAAGCTGGACGGCACCGCCAAGGGCGGCGTGATCGCCGCCATCGCCAAGCAGCGGCCGAT
TCCGCTACGCTTCGTCGGCGTCGGCGAAAGCATCGACGACCTGCGGCCGTTCGACAGCCGCGACTACATCGACGCGCTGT
TCGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (92-157)

• SRP54-type protein, GTPase domain (SRP54) (175-374)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	63.158	100	0.704