Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   A3L25_RS28075 Genome accession   NZ_CP050951
Coordinates   6198342..6198743 (-) Length   133 a.a.
NCBI ID   WP_016501972.1    Uniprot ID   A0AAU8S4N7
Organism   Pseudomonas putida strain JQ581     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6193342..6203743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A3L25_RS28060 (A3L25_028095) - 6195306..6197330 (-) 2025 WP_230676093.1 methyl-accepting chemotaxis protein -
  A3L25_RS28065 (A3L25_028100) - 6197378..6197932 (-) 555 WP_063423351.1 chemotaxis protein CheW -
  A3L25_RS28070 (A3L25_028105) pilH 6197929..6198294 (-) 366 WP_016489541.1 twitching motility response regulator PilH -
  A3L25_RS28075 (A3L25_028110) pilG 6198342..6198743 (-) 402 WP_016501972.1 response regulator Regulator
  A3L25_RS28080 (A3L25_028115) gshB 6198896..6199849 (+) 954 WP_063423350.1 glutathione synthase -
  A3L25_RS28085 (A3L25_028120) - 6199941..6200846 (+) 906 WP_016501974.1 energy transducer TonB -
  A3L25_RS28090 (A3L25_028125) - 6201025..6201594 (+) 570 WP_016501975.1 YqgE/AlgH family protein -
  A3L25_RS28095 (A3L25_028130) ruvX 6201594..6202019 (+) 426 WP_049275542.1 Holliday junction resolvase RuvX -
  A3L25_RS28100 (A3L25_028135) pyrR 6202069..6202587 (+) 519 WP_063423349.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  A3L25_RS28105 (A3L25_028140) - 6202600..6203604 (+) 1005 WP_008099987.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14601.87 Da        Isoelectric Point: 6.4772

>NTDB_id=435755 A3L25_RS28075 WP_016501972.1 6198342..6198743(-) (pilG) [Pseudomonas putida strain JQ581]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHQPSIIFVDVLMPRLDGYQTCAVIKHNSAFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFTAPPQHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=435755 A3L25_RS28075 WP_016501972.1 6198342..6198743(-) (pilG) [Pseudomonas putida strain JQ581]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCGCGCACGATCCGCCGCACCGCGCAGATGCTGCTCGGTGAAGC
GGGCTGCGAGGTGATCACCGCCAGCGATGGCTTCGATGCCCTGGCCAAGATCGTCGACCACCAGCCCAGCATCATCTTCG
TTGATGTGCTGATGCCGCGCCTGGACGGCTACCAGACCTGCGCCGTGATCAAGCACAACAGTGCTTTCAAGGACACCCCG
GTGATCCTGCTGTCGTCGCGCGACGGGTTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGCTCTGATCAGTTCCTGACCAA
ACCGTTCAGCAAGGAAGAGCTGCTCGACGCGATCCGCGCCCACGTGCCCGGGTTTACCGCGCCTCCACAACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70

90.226

0.632