Detailed information NTG0043540

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: SMUGS5_RS06585
• Genome accession: NC_018089
• Coordinates: 1385664..1387868 (-)
• Length: 734 a.a.
• NCBI ID: WP_002279601.1
• Uniprot ID: -
• Organism: Streptococcus mutans GS-5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1380664..1392868

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMUGS5_RS06550 (SMUGS5_06535)	-	1380817..1381512 (-)	696	WP_002268918.1	DnaD domain-containing protein	-
SMUGS5_RS06555 (SMUGS5_06540)	metA	1381522..1382466 (-)	945	WP_002263079.1	homoserine O-succinyltransferase	-
SMUGS5_RS06560 (SMUGS5_06545)	-	1382570..1383088 (-)	519	WP_002263078.1	adenine phosphoribosyltransferase	-
SMUGS5_RS10755 (SMUGS5_06550)	-	1383220..1383432 (-)	213	WP_002266214.1	ClbS/DfsB family four-helix bundle protein	-
SMUGS5_RS10760	-	1383549..1383608 (-)	60	Protein_1284	hypothetical protein	-
SMUGS5_RS06575 (SMUGS5_06560)	-	1383761..1384393 (-)	633	WP_002267179.1	GyrI-like domain-containing protein	-
SMUGS5_RS06580 (SMUGS5_06565)	-	1384645..1385544 (-)	900	WP_002263075.1	helix-turn-helix transcriptional regulator	-
SMUGS5_RS06585 (SMUGS5_06570)	recJ	1385664..1387868 (-)	2205	WP_002279601.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
SMUGS5_RS06590 (SMUGS5_06575)	-	1387865..1388629 (-)	765	WP_002265204.1	SDR family NAD(P)-dependent oxidoreductase	-
SMUGS5_RS06595 (SMUGS5_06580)	rnz	1388626..1389555 (-)	930	WP_002263072.1	ribonuclease Z	-
SMUGS5_RS06600 (SMUGS5_06585)	-	1389583..1390218 (-)	636	WP_002279600.1	hypothetical protein	-
SMUGS5_RS06605 (SMUGS5_06590)	hflX	1390205..1391452 (-)	1248	WP_014835002.1	GTPase HflX	-
SMUGS5_RS06610 (SMUGS5_06595)	miaA	1391641..1392525 (-)	885	WP_002279599.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
SMUGS5_RS06615 (SMUGS5_06600)	-	1392600..1392775 (+)	176	Protein_1293	DUF3042 family protein	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82354.14 Da
• Isoelectric Point: 4.5069

>NTDB_id=43540 SMUGS5_RS06585 WP_002279601.1 1385664..1387868(-) (recJ) [Streptococcus mutans GS-5]
MITSKYAWKINEKKPDDGFFELAKKENLNPTAAQILYERGFKTSEDIEAFLKPDLSQLHDPFLLNNMDKAVTRIRRAIET
NERILIYGDYDADGMTSSSIAKEALEMLGAEVEAYLPNRFTDGYGPNLSVYKYFIEQQDISLILTVDNGIAGHDAIAYAQ
GQGVDVIVTDHHSMPAELPSAYAVVHPEHPDANYPFKCLAGCGVAFKLACALLESIPTEMLDLVAIGTIADMVSLTDENR
VMVKYGLEILKQTERVGLQELIALAGVDFADINEETIGFKLAPQLNALGRLDDPNPAVELLTGFDDEEAKTIAAMINEKN
EERKTIVQAIFEEAMTLVDENKSVQVLAKEGWHAGVLGIVAGRIMEQINQPVIVLNIENGLAKGSARSLESVNIFNALDA
HRDLFMAFGGHAGAAGMTLEADKLEELSQVLNDYIQEHAIDLSQKSALVIDEELYLPELSLDTLKGLETLAPFGMNNKKP
IFLLRDFTVKQVRTMGQNGAHLKLKVAQEQAAFDLLAFNYGSLVTEFQQAQHLELAVTLSVNRWNGNTSLQLMLVDARVE
GIQLLDIRARNSALPDGVPFLEDQTDSKAVVLFEIPEKEEDLLALFENRDFEVIYFKNRIKHQYYLTGSGTREQFAKLYK
TIYQFPEFDVRHKLKELSQFLKIPDILLVKMIQIFDELDFVSIDDGIMTVNKDAQKREISDSHIYQDLKKLVKFQELMAL
GTPQEIYEFLKRDR

Nucleotide

• Length: 2205 bp

>NTDB_id=43540 SMUGS5_RS06585 WP_002279601.1 1385664..1387868(-) (recJ) [Streptococcus mutans GS-5]
ATGATTACTTCCAAATATGCTTGGAAAATAAATGAAAAAAAGCCAGATGATGGCTTTTTTGAGCTGGCTAAAAAAGAAAA
TCTCAATCCTACAGCTGCACAAATTTTATATGAGCGAGGTTTTAAAACAAGTGAAGATATAGAAGCGTTTTTGAAACCTG
ATTTGTCTCAATTACATGATCCCTTTCTTTTAAATAATATGGACAAGGCTGTCACGCGTATTCGCAGAGCTATTGAAACC
AATGAACGAATTCTTATCTATGGGGATTACGATGCTGATGGTATGACGTCAAGTTCCATTGCAAAGGAAGCTTTGGAAAT
GCTGGGAGCTGAGGTAGAGGCTTATCTTCCTAATCGTTTTACCGATGGTTATGGTCCCAATCTCAGTGTTTATAAATATT
TTATTGAGCAGCAGGATATATCACTGATTCTTACTGTGGATAATGGTATTGCTGGCCATGATGCTATTGCTTATGCGCAA
GGACAAGGTGTTGATGTCATTGTTACTGACCACCACAGTATGCCTGCTGAGCTTCCTTCAGCTTATGCTGTTGTTCATCC
TGAACATCCGGATGCTAATTATCCTTTTAAATGTTTAGCAGGGTGCGGTGTCGCTTTTAAGCTAGCCTGTGCCTTGTTAG
AATCCATTCCGACAGAGATGCTGGATTTGGTGGCTATTGGAACCATTGCCGATATGGTATCGCTCACCGATGAAAATCGT
GTAATGGTCAAATACGGTCTTGAAATCCTAAAACAAACAGAGCGCGTCGGTCTGCAAGAATTAATAGCACTTGCAGGTGT
TGATTTTGCTGATATCAATGAAGAAACTATTGGTTTCAAGTTAGCACCCCAGCTTAATGCTTTGGGACGTCTGGATGATC
CCAATCCTGCTGTTGAATTGTTGACAGGCTTTGATGATGAAGAAGCAAAGACTATTGCGGCCATGATTAATGAAAAAAAT
GAGGAGCGAAAGACCATTGTACAGGCTATTTTTGAAGAAGCTATGACTCTGGTTGATGAGAACAAATCTGTTCAGGTCTT
GGCTAAAGAAGGCTGGCATGCTGGTGTTCTGGGGATTGTTGCAGGTCGTATTATGGAACAAATAAACCAGCCAGTCATTG
TTCTTAATATTGAAAATGGCCTTGCCAAGGGAAGTGCCCGTAGTTTAGAGTCAGTCAATATTTTTAATGCCCTTGATGCG
CATAGGGATTTATTTATGGCTTTTGGAGGCCATGCTGGAGCTGCGGGTATGACTCTAGAGGCTGATAAATTAGAAGAATT
ATCACAGGTTTTAAATGATTATATTCAAGAACATGCGATTGATTTATCGCAAAAGTCTGCTTTAGTAATTGATGAAGAAT
TGTACTTGCCAGAACTTAGTTTAGATACTTTAAAAGGGCTTGAAACTTTGGCTCCTTTTGGTATGAACAATAAAAAACCT
ATTTTTTTACTAAGGGATTTTACAGTCAAACAGGTTAGAACGATGGGACAAAATGGAGCTCATTTGAAGTTAAAAGTGGC
TCAGGAACAGGCTGCCTTTGATCTCCTTGCCTTTAACTACGGTTCGCTCGTGACAGAATTTCAACAAGCTCAGCATCTCG
AACTAGCTGTTACTTTATCGGTTAATCGTTGGAACGGCAATACTAGTCTACAATTGATGCTAGTTGATGCGCGTGTTGAA
GGCATTCAGTTGCTTGATATCCGTGCTCGCAATAGCGCTCTGCCTGACGGAGTTCCCTTTTTAGAAGATCAAACAGATAG
TAAGGCAGTTGTCTTATTTGAAATACCGGAAAAAGAAGAAGACCTTCTAGCACTTTTTGAAAATCGGGATTTTGAAGTCA
TTTATTTTAAAAATAGGATTAAGCATCAATATTATTTAACAGGATCTGGAACGCGTGAGCAATTTGCTAAGCTTTACAAG
ACGATTTACCAGTTTCCGGAATTTGATGTACGTCATAAGTTAAAAGAGCTCAGTCAATTTCTCAAAATTCCAGATATTTT
GCTGGTCAAGATGATCCAAATTTTTGATGAATTGGACTTTGTTTCCATTGATGATGGCATTATGACAGTTAATAAAGATG
CTCAAAAACGGGAAATTTCTGACAGTCATATTTATCAAGATTTGAAAAAATTAGTGAAATTCCAAGAGTTAATGGCATTA
GGAACACCTCAGGAAATATATGAATTTTTAAAACGCGATCGCTAA

Domains

Predicted by InterProScan.

• DHHA1 domain (DHHA1) (317-435)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (584-729)

• RecJ OB domain (RecJ_OB) (450-556)

• DHH family (DHH) (83-228)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	64.81	100	0.65
recJ	Bacillus subtilis subsp. subtilis str. 168	37.597	100	0.396