Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SMUGS5_RS06515 Genome accession   NC_018089
Coordinates   1375136..1375615 (-) Length   159 a.a.
NCBI ID   WP_002267187.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1370136..1380615
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS06500 (SMUGS5_06480) alsS 1370863..1372542 (-) 1680 WP_002279606.1 acetolactate synthase AlsS -
  SMUGS5_RS06505 (SMUGS5_06485) - 1372675..1373907 (-) 1233 WP_002267189.1 tetratricopeptide repeat protein -
  SMUGS5_RS06510 (SMUGS5_06490) - 1373897..1375066 (-) 1170 WP_002264617.1 AI-2E family transporter -
  SMUGS5_RS06515 (SMUGS5_06495) mutX 1375136..1375615 (-) 480 WP_002267187.1 NUDIX hydrolase Machinery gene
  SMUGS5_RS06525 (SMUGS5_06505) rfbB 1375914..1376960 (-) 1047 WP_002279604.1 dTDP-glucose 4,6-dehydratase -
  SMUGS5_RS10165 (SMUGS5_06510) - 1377352..1377525 (-) 174 WP_002263086.1 hypothetical protein -
  SMUGS5_RS06530 (SMUGS5_06515) - 1377588..1378184 (-) 597 WP_002279603.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  SMUGS5_RS06535 (SMUGS5_06520) rfbA 1378186..1379055 (-) 870 WP_002263084.1 glucose-1-phosphate thymidylyltransferase RfbA -
  SMUGS5_RS06540 (SMUGS5_06525) - 1379351..1380139 (-) 789 WP_002279602.1 Nif3-like dinuclear metal center hexameric protein -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18916.58 Da        Isoelectric Point: 5.6576

>NTDB_id=43539 SMUGS5_RS06515 WP_002267187.1 1375136..1375615(-) (mutX) [Streptococcus mutans GS-5]
MTKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILEDAPFFSAKFVYQEQKLVDKHVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=43539 SMUGS5_RS06515 WP_002267187.1 1375136..1375615(-) (mutX) [Streptococcus mutans GS-5]
ATGACAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGCAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGAAG
ATGCCCCCTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAACATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

99.371

0.692

Multiple sequence alignment