Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   SMUGS5_RS04090 Genome accession   NC_018089
Coordinates   850613..852385 (+) Length   590 a.a.
NCBI ID   WP_014834941.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 845613..857385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS04075 (SMUGS5_04000) - 846542..848410 (+) 1869 WP_014834940.1 ABC-F family ATP-binding cassette domain-containing protein -
  SMUGS5_RS04085 (SMUGS5_04010) rcrP 848866..850602 (+) 1737 WP_002283303.1 ABC transporter ATP-binding protein Regulator
  SMUGS5_RS04090 (SMUGS5_04015) rcrQ 850613..852385 (+) 1773 WP_014834941.1 ABC transporter ATP-binding protein Regulator
  SMUGS5_RS04095 (SMUGS5_04020) - 852501..853421 (+) 921 WP_014834942.1 AEC family transporter -

Sequence


Protein


Download         Length: 590 a.a.        Molecular weight: 66728.41 Da        Isoelectric Point: 6.8372

>NTDB_id=43517 SMUGS5_RS04090 WP_014834941.1 850613..852385(+) (rcrQ) [Streptococcus mutans GS-5]
MKKKTVFLRLWYYLKTYKGSLFLAIFLKILSSVMNVLEPFILGLVMTELTANLIDIARGVQGAHLNISYITMILFLYFLR
GLLYSIGSYGSNYFMTNAVQKSIYDLRHDLSEKINKIPVSYFDKHQFGDMLGRFTNDVETVSNALQQSFLQIINAFLTII
LVVVMVLCLNLTLAAIILVCISLTYFSSRFILRKSQPYFKKQANALGDMNSFVQENLTGFNVIKLYGREEISAETFRTIT
ENLRDVGFKASFISGIMMPVLNAISDLAYLIVALVGGLQVLAGRLTIGNMQAFVQYIWQINQPIQTITQLSSVLQSAKSS
LERIFEVLDETDEVNQVKEKLEHDLTGQVTFHNVAFQYTEDKPLIRHFDLDVKPGQMIAVVGPTGAGKTTLINLLMRFYD
VTQGAITVDNHDIRNLSRQEYRKQFGMVLQDAWLYEGTIKDNLRFGNLQASDEEIVEAAKAANVDHFIRTLPDGYNMEVN
QESNNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMSKLMEGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHQSLLADKGFYYDLYMSQFSAKTN

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=43517 SMUGS5_RS04090 WP_014834941.1 850613..852385(+) (rcrQ) [Streptococcus mutans GS-5]
ATGAAAAAGAAAACTGTTTTTTTACGCTTATGGTATTATTTGAAGACCTATAAAGGTTCACTTTTTTTGGCCATTTTCTT
AAAAATACTTAGCAGTGTCATGAATGTCCTTGAACCTTTTATTTTAGGACTGGTAATGACAGAATTAACGGCTAACCTAA
TTGATATAGCTCGCGGAGTTCAAGGCGCTCATCTTAATATCAGTTATATCACCATGATTTTGTTTCTTTATTTTTTACGC
GGATTGCTGTATAGTATTGGCTCTTACGGTTCTAATTACTTTATGACTAATGCAGTGCAAAAAAGTATTTACGATTTGCG
TCATGATTTAAGTGAAAAGATTAATAAGATTCCTGTTTCCTATTTTGATAAACATCAATTTGGTGATATGTTAGGACGTT
TTACCAATGACGTTGAAACGGTCTCTAACGCTTTGCAGCAGAGCTTTCTGCAAATTATTAATGCCTTTTTAACGATTATC
CTTGTTGTGGTTATGGTACTCTGCCTTAATTTGACCTTGGCGGCGATTATTCTTGTTTGTATTTCGCTGACTTATTTCAG
TTCTCGTTTTATTTTAAGGAAATCACAGCCTTATTTTAAAAAACAGGCTAATGCTTTAGGGGATATGAACAGTTTCGTTC
AGGAAAACTTAACGGGCTTTAATGTCATAAAACTCTATGGACGTGAAGAAATATCTGCTGAAACCTTTCGAACTATCACA
GAAAATTTACGAGATGTCGGTTTTAAAGCCAGTTTTATTTCTGGAATAATGATGCCAGTTCTTAATGCTATCTCAGACTT
AGCTTATTTGATTGTTGCATTAGTTGGCGGCCTGCAGGTCTTAGCAGGGAGACTAACTATTGGTAATATGCAGGCCTTTG
TTCAATATATTTGGCAAATCAATCAGCCTATTCAGACCATCACACAATTATCAAGTGTTCTTCAAAGTGCTAAATCTTCT
CTAGAACGTATTTTTGAGGTTTTGGATGAAACAGATGAAGTCAATCAAGTCAAGGAAAAGCTGGAACATGATTTGACAGG
GCAAGTGACCTTTCATAATGTCGCCTTTCAATATACTGAAGATAAGCCTTTAATTCGACATTTTGATTTAGATGTTAAAC
CGGGTCAGATGATTGCTGTTGTTGGTCCGACCGGGGCGGGTAAGACAACTCTTATCAATCTTTTGATGCGTTTTTATGAT
GTTACCCAAGGAGCGATTACAGTAGATAATCATGATATCCGTAACCTTTCCCGTCAGGAATATCGGAAACAATTTGGGAT
GGTTCTTCAAGATGCTTGGTTATATGAAGGGACGATCAAAGACAATTTACGCTTTGGAAATTTGCAGGCAAGTGATGAGG
AAATTGTCGAAGCAGCCAAGGCAGCTAATGTCGATCATTTTATCCGAACCCTTCCAGACGGTTATAATATGGAAGTCAAT
CAAGAATCTAATAATATTTCTTTGGGGCAAAAGCAATTATTAACCATCGCACGAGCGCTGCTGGCTGATCCCAAAATTCT
GATTCTGGATGAAGCGACTTCTTCAGTTGATACTCGTTTGGAACTTCTCATTCAAAAAGCTATGAGTAAGCTTATGGAAG
GCCGCACTAGCTTTGTTATTGCTCATCGTCTTTCAACTATCCAAGAAGCGGATAAGATTCTTGTCCTTAAGGATGGTCAA
ATTATTGAACAGGGGAACCATCAAAGTCTCTTAGCTGACAAGGGCTTCTATTATGATTTGTATATGAGTCAGTTTAGCGC
TAAAACCAATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

45.025

100

0.453


Multiple sequence alignment