Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SMUGS5_RS04085 Genome accession   NC_018089
Coordinates   848866..850602 (+) Length   578 a.a.
NCBI ID   WP_002283303.1    Uniprot ID   -
Organism   Streptococcus mutans GS-5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 843866..855602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUGS5_RS04065 (SMUGS5_03990) dapB 844570..845337 (+) 768 WP_002286376.1 4-hydroxy-tetrahydrodipicolinate reductase -
  SMUGS5_RS04070 (SMUGS5_03995) - 845334..846539 (+) 1206 WP_014834939.1 CCA tRNA nucleotidyltransferase -
  SMUGS5_RS04075 (SMUGS5_04000) - 846542..848410 (+) 1869 WP_014834940.1 ABC-F family ATP-binding cassette domain-containing protein -
  SMUGS5_RS04085 (SMUGS5_04010) rcrP 848866..850602 (+) 1737 WP_002283303.1 ABC transporter ATP-binding protein Regulator
  SMUGS5_RS04090 (SMUGS5_04015) rcrQ 850613..852385 (+) 1773 WP_014834941.1 ABC transporter ATP-binding protein Regulator
  SMUGS5_RS04095 (SMUGS5_04020) - 852501..853421 (+) 921 WP_014834942.1 AEC family transporter -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65126.00 Da        Isoelectric Point: 9.4876

>NTDB_id=43516 SMUGS5_RS04085 WP_002283303.1 848866..850602(+) (rcrP) [Streptococcus mutans GS-5]
MTYIWSYLKKYPKWLLLDILGALLFVVVNLGLPTALARMIDQGITPADKQALYFWAFIMFIIVLLGIVGRITLAYASGRL
TTTMIRDMRNDMYDKLQEYSHHEYKKIGVSSLVTRMTSDAFVLMQFAEMSLRMGIVTPLMMVSSVIMVLVTSPSLAWIVV
FAIPFLILVIYYVAAKTRPLSEKQQNTLDKINQYVRENLTGLRVIRAFARENFQEERFDLKNRSYEKTSNRLFKLTGLTE
ALFVQIIIIMIVAIVWFSLDPLKQGTIKIGDLVAFIEYSFHALFSFLIFANIFTMYPRMAVSSKRIQEVMAMPISIDPNI
NGIKETKTKGYLEFDNVTFAYPGETESPVLHDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGRILVDGVDVRD
YNLKALRQKIGFIPQKALLFTGTIGENLKYGKKDASLAELHSAADIAQAKEFIESRAEKFDSHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDSLLRQRLKEVTGNSTVLIVAQRVGTIMNADQIIVLDEGEIVGRGSHDELMKSNA
IYREIANSQLNQQSLTQE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=43516 SMUGS5_RS04085 WP_002283303.1 848866..850602(+) (rcrP) [Streptococcus mutans GS-5]
ATGACATATATTTGGTCTTATTTAAAAAAATATCCCAAATGGTTACTATTGGACATTCTTGGTGCCCTTTTATTTGTTGT
TGTCAATTTGGGCTTACCGACAGCTCTGGCACGAATGATTGATCAAGGAATCACACCGGCTGATAAACAAGCTCTTTATT
TTTGGGCTTTTATTATGTTTATCATTGTTCTTTTAGGAATAGTCGGGCGTATTACTTTAGCCTATGCTTCTGGCAGATTA
ACTACGACCATGATTCGCGATATGCGCAATGATATGTATGATAAATTGCAAGAGTACTCCCATCACGAATATAAGAAAAT
TGGTGTCTCTTCCTTGGTCACACGTATGACTAGTGACGCCTTTGTGCTTATGCAATTTGCAGAAATGTCCTTGCGGATGG
GAATTGTTACTCCCTTGATGATGGTTTCAAGCGTTATTATGGTTTTGGTGACTAGCCCATCTTTGGCTTGGATTGTAGTA
TTTGCTATTCCTTTTTTGATACTGGTGATTTATTATGTTGCTGCAAAAACACGCCCCTTATCTGAAAAGCAGCAAAATAC
GCTTGATAAGATTAATCAGTACGTTCGTGAAAATTTAACAGGCCTACGTGTTATTCGTGCCTTTGCGCGTGAAAATTTTC
AAGAAGAACGCTTTGACTTAAAAAACAGAAGTTATGAAAAGACTTCCAACAGACTATTTAAATTAACCGGACTCACAGAA
GCCCTGTTTGTTCAGATTATCATTATCATGATAGTAGCTATTGTCTGGTTTTCATTAGATCCGCTTAAACAAGGGACTAT
CAAGATTGGTGATTTGGTTGCCTTTATTGAATATAGTTTTCATGCTCTCTTTTCTTTTTTAATATTTGCTAATATTTTCA
CTATGTATCCGCGAATGGCCGTATCTAGTAAACGTATCCAAGAGGTAATGGCTATGCCTATTTCCATTGATCCCAATATA
AATGGCATTAAGGAGACTAAAACCAAAGGCTATTTGGAATTTGACAATGTGACCTTTGCCTATCCCGGTGAGACCGAAAG
TCCTGTCTTGCATGATATTTCTTTTAAAGCTAAACCGGGAGAAACGATTGCTTTTATTGGCAGTACAGGTTCAGGAAAGT
CGTCGCTTGTTAATTTGATTCCCCGTTTTTATGATGTGACTTTGGGTCGGATTCTGGTTGATGGTGTGGATGTCCGTGAC
TATAATCTTAAGGCTCTGCGTCAGAAAATTGGTTTTATTCCGCAAAAAGCGCTGCTATTTACTGGAACCATTGGAGAAAA
TCTTAAGTATGGGAAAAAGGATGCTAGTTTGGCTGAACTGCATTCAGCTGCTGATATTGCACAAGCTAAAGAATTCATCG
AAAGTCGAGCTGAGAAATTTGATAGCCACTTAGCAGAAGGCGGCAGCAATCTTTCAGGGGGACAGAAGCAGCGCTTGTCT
ATTGCGCGTGCAGTTGTTAAGAAACCAGATATCTATATTTTTGATGATTCCTTTTCAGCCTTAGATTATAAGACGGATAG
TCTCCTGCGTCAGCGTTTGAAAGAAGTGACAGGCAATTCAACAGTGCTCATTGTAGCCCAACGTGTCGGAACTATTATGA
ATGCTGACCAGATTATTGTACTGGATGAAGGAGAAATTGTTGGTCGCGGCAGCCATGATGAACTCATGAAGTCCAATGCC
ATTTATCGTGAAATTGCCAACTCACAGCTCAATCAGCAAAGTTTAACGCAAGAGTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(17-280)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.201

95.329

0.374

Multiple sequence alignment