Detailed information
Bioinformatically predicted
Overview
| Name | cipB | Type | Regulator |
| Locus tag | SMUGS5_RS01935 | Genome accession | NC_018089 |
| Coordinates | 386805..387035 (+) | Length | 76 a.a. |
| NCBI ID | WP_002275977.1 | Uniprot ID | Q8DVP7 |
| Organism | Streptococcus mutans GS-5 | ||
| Function | indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation |
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Genomic Context
Location: 381805..392035
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMUGS5_RS01915 (SMUGS5_01820) | rnpM | 382379..382675 (+) | 297 | WP_002263922.1 | RNase P modulator RnpM | - |
| SMUGS5_RS01920 (SMUGS5_01825) | - | 382668..382970 (+) | 303 | WP_002262601.1 | YlxQ-related RNA-binding protein | - |
| SMUGS5_RS10815 | - | 382991..383086 (+) | 96 | Protein_353 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| SMUGS5_RS01925 (SMUGS5_01830) | infB | 383519..385741 (+) | 2223 | Protein_354 | translation initiation factor IF-2 | - |
| SMUGS5_RS01930 (SMUGS5_01835) | rbfA | 385975..386325 (+) | 351 | WP_002262599.1 | 30S ribosome-binding factor RbfA | - |
| SMUGS5_RS10720 | - | 386403..386537 (-) | 135 | WP_002267544.1 | hypothetical protein | - |
| SMUGS5_RS01935 (SMUGS5_01840) | cipB | 386805..387035 (+) | 231 | WP_002275977.1 | bacteriocin class II family protein | Regulator |
| SMUGS5_RS01940 (SMUGS5_01845) | - | 387426..387869 (+) | 444 | WP_014834855.1 | CopY/TcrY family copper transport repressor | - |
| SMUGS5_RS01945 (SMUGS5_01850) | - | 387866..390094 (+) | 2229 | WP_002267008.1 | heavy metal translocating P-type ATPase | - |
| SMUGS5_RS01950 (SMUGS5_01855) | copZ | 390107..390310 (+) | 204 | WP_002264873.1 | copper chaperone CopZ | - |
| SMUGS5_RS01955 (SMUGS5_01860) | - | 390556..391377 (+) | 822 | WP_032506485.1 | Cof-type HAD-IIB family hydrolase | - |
| SMUGS5_RS01960 (SMUGS5_01865) | - | 391483..391974 (-) | 492 | WP_042899548.1 | YgjV family protein | - |
Sequence
Protein
Download Length: 76 a.a. Molecular weight: 7229.19 Da Isoelectric Point: 3.7781
>NTDB_id=43492 SMUGS5_RS01935 WP_002275977.1 386805..387035(+) (cipB) [Streptococcus mutans GS-5]
MNTQAFEQFNVMDNEALSTVEGGGMIRCALGTAGSAGLGFVGGMGAGTVTLPVVGTVSGAALGGWSGAAVGAATFC
MNTQAFEQFNVMDNEALSTVEGGGMIRCALGTAGSAGLGFVGGMGAGTVTLPVVGTVSGAALGGWSGAAVGAATFC
Nucleotide
Download Length: 231 bp
>NTDB_id=43492 SMUGS5_RS01935 WP_002275977.1 386805..387035(+) (cipB) [Streptococcus mutans GS-5]
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAACTGTTGAGGGTGGTGGTATGATTAG
ATGTGCACTTGGCACAGCTGGTTCTGCAGGTTTAGGATTTGTAGGGGGTATGGGAGCTGGTACAGTTACTCTCCCAGTCG
TTGGTACAGTATCTGGAGCGGCTTTAGGAGGCTGGTCTGGAGCAGCTGTAGGTGCTGCTACTTTTTGTTGA
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAACTGTTGAGGGTGGTGGTATGATTAG
ATGTGCACTTGGCACAGCTGGTTCTGCAGGTTTAGGATTTGTAGGGGGTATGGGAGCTGGTACAGTTACTCTCCCAGTCG
TTGGTACAGTATCTGGAGCGGCTTTAGGAGGCTGGTCTGGAGCAGCTGTAGGTGCTGCTACTTTTTGTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cipB | Streptococcus mutans UA159 |
71.429 |
55.263 |
0.395 |