Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   HCU65_RS20765 Genome accession   NZ_CP050705
Coordinates   392916..393056 (+) Length   46 a.a.
NCBI ID   WP_223254972.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain PENSV20     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 387916..398056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU65_RS20760 - 389783..392875 (+) 3093 Protein_355 amino acid adenylation domain-containing protein -
  HCU65_RS20765 comS 392916..393056 (+) 141 WP_223254972.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5352.32 Da        Isoelectric Point: 10.1700

>NTDB_id=434162 HCU65_RS20765 WP_223254972.1 392916..393056(+) (comS) [Bacillus atrophaeus strain PENSV20]
MNRFSKRLIKSIILYPRPSEGCISSISLDKQAQATTSLLYFCWKEK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=434162 HCU65_RS20765 WP_223254972.1 392916..393056(+) (comS) [Bacillus atrophaeus strain PENSV20]
TTGAACCGATTCAGCAAGCGCCTTATCAAGAGCATTATCCTGTATCCTCGGCCCAGCGAAGGATGTATATCCTCAATCAG
CTTGGACAAACAAGCACAAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

80.435

100

0.804