Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   HCU65_RS06060 Genome accession   NZ_CP050705
Coordinates   1223946..1224602 (+) Length   218 a.a.
NCBI ID   WP_003327576.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain PENSV20     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1218946..1229602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU65_RS06025 (HCU65_06040) oppF 1219177..1220094 (+) 918 WP_035175065.1 oligopeptide ABC transporter ATP-binding protein OppF -
  HCU65_RS20870 - 1220186..1220350 (+) 165 WP_258235477.1 hypothetical protein -
  HCU65_RS06035 (HCU65_06050) - 1220483..1221664 (+) 1182 WP_373565619.1 putative glycoside hydrolase -
  HCU65_RS06040 (HCU65_06055) - 1221814..1222392 (+) 579 WP_003327580.1 GNAT family N-acetyltransferase -
  HCU65_RS06045 (HCU65_06060) spx 1222573..1222968 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  HCU65_RS06050 (HCU65_06065) - 1223004..1223666 (-) 663 WP_003327577.1 TerC family protein -
  HCU65_RS06060 (HCU65_06070) mecA 1223946..1224602 (+) 657 WP_003327576.1 adaptor protein MecA Regulator
  HCU65_RS06065 (HCU65_06075) coiA 1224761..1225924 (+) 1164 WP_219947365.1 competence protein CoiA family protein Machinery gene
  HCU65_RS06070 (HCU65_06080) pepF 1226153..1227982 (+) 1830 WP_003327574.1 oligoendopeptidase F -
  HCU65_RS06075 (HCU65_06085) - 1228018..1228185 (-) 168 WP_003327573.1 hypothetical protein -
  HCU65_RS06080 (HCU65_06090) spxH 1228501..1229403 (-) 903 WP_106034588.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 26004.74 Da        Isoelectric Point: 3.9956

>NTDB_id=434109 HCU65_RS06060 WP_003327576.1 1223946..1224602(+) (mecA) [Bacillus atrophaeus strain PENSV20]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEQADENLDALLDDFQKEEQADNQEEKEQKLQFVLRFDDFEDLISLSNLNVNGSKTTLYSFENR
YYLYVDFQEMSDEEVENQLSILLEYTYESSISIHRIEEYGKLIISEDVLNTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=434109 HCU65_RS06060 WP_003327576.1 1223946..1224602(+) (mecA) [Bacillus atrophaeus strain PENSV20]
ATGGAAATAGAAAGAATAAACGAACATACTGTAAAGTTTTATATGTCATATGGAGATATTGAAGACCGCGGTTTCGACAG
AGAAGAGATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAGGAAGAAGAAT
TCGCTGTAGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTCGATAAAGGCTTGGAGATTATCGTTACAAAAGCCCAGCTT
TCTAAAGACGGACAAAAGCTCGAACTGCCGATACCTGAAGATAAAAAGCAAGAACAAGCAGATGAGAATCTCGATGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGCCGACAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTCGTCTTGCGGTTTG
ATGATTTTGAGGACTTGATTTCTCTTTCAAATTTGAACGTAAACGGAAGCAAAACGACGCTTTATTCGTTTGAAAACCGG
TATTATTTATATGTAGATTTTCAAGAAATGTCTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTAGAGTACACATA
TGAATCCTCAATCAGCATACACCGCATCGAAGAATACGGCAAGCTGATTATTTCAGAGGATGTTCTGAATACAATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

92.661

100

0.927