Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HCU65_RS05945 Genome accession   NZ_CP050705
Coordinates   1202222..1202413 (+) Length   63 a.a.
NCBI ID   WP_010788228.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain PENSV20     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1197222..1207413
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU65_RS05915 (HCU65_05930) argF 1198065..1199035 (+) 971 Protein_1124 ornithine carbamoyltransferase -
  HCU65_RS05920 (HCU65_05935) - 1199117..1199296 (+) 180 WP_003327605.1 YjzC family protein -
  HCU65_RS05925 (HCU65_05940) - 1199325..1199513 (-) 189 WP_003327604.1 YjzD family protein -
  HCU65_RS05930 (HCU65_05945) - 1199772..1200506 (+) 735 WP_063637420.1 hypothetical protein -
  HCU65_RS05935 (HCU65_05950) - 1200589..1201164 (+) 576 WP_219947363.1 hypothetical protein -
  HCU65_RS05940 (HCU65_05955) med 1201254..1202207 (+) 954 WP_013390469.1 BMP family ABC transporter substrate-binding protein Regulator
  HCU65_RS05945 (HCU65_05960) comZ 1202222..1202413 (+) 192 WP_010788228.1 ComZ family protein Regulator
  HCU65_RS05950 (HCU65_05965) - 1202443..1202670 (-) 228 WP_003327598.1 hypothetical protein -
  HCU65_RS05955 (HCU65_05970) fabH 1202842..1203780 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  HCU65_RS05960 (HCU65_05975) fabF 1203802..1205040 (+) 1239 WP_061670511.1 beta-ketoacyl-ACP synthase II -
  HCU65_RS05965 (HCU65_05980) - 1205118..1205903 (+) 786 WP_061670512.1 DUF2268 domain-containing protein -
  HCU65_RS05970 (HCU65_05985) - 1206095..1207081 (+) 987 WP_061670513.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7112.08 Da        Isoelectric Point: 4.2564

>NTDB_id=434106 HCU65_RS05945 WP_010788228.1 1202222..1202413(+) (comZ) [Bacillus atrophaeus strain PENSV20]
MQHEKSLEFLQIAMKYLPEAKAELEKSGIELSAESIQPFMNLFSTVMAEAYELGKSDAKSENE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=434106 HCU65_RS05945 WP_010788228.1 1202222..1202413(+) (comZ) [Bacillus atrophaeus strain PENSV20]
ATGCAGCATGAAAAATCACTTGAATTTTTGCAAATCGCGATGAAATATTTGCCGGAAGCAAAAGCGGAGCTGGAAAAATC
GGGGATCGAGCTGTCCGCCGAGTCCATACAGCCATTTATGAATCTGTTTTCAACGGTGATGGCGGAAGCTTACGAGCTTG
GCAAGTCCGACGCAAAATCAGAAAATGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

90.476

100

0.905