Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   HCU65_RS04395 Genome accession   NZ_CP050705
Coordinates   908215..909006 (+) Length   263 a.a.
NCBI ID   WP_004430590.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain PENSV20     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 903215..914006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HCU65_RS04365 (HCU65_04385) - 904059..905072 (+) 1014 WP_219947763.1 iron ABC transporter permease -
  HCU65_RS04370 (HCU65_04390) - 905190..906071 (+) 882 WP_219947244.1 PhzF family phenazine biosynthesis isomerase -
  HCU65_RS04375 (HCU65_04395) - 906152..906736 (+) 585 WP_061573406.1 nitroreductase -
  HCU65_RS04380 (HCU65_04400) - 906775..906966 (-) 192 WP_004430587.1 YfhD family protein -
  HCU65_RS04385 (HCU65_04405) - 907044..907154 (-) 111 WP_003223230.1 YfhE family protein -
  HCU65_RS04390 (HCU65_04410) - 907213..908124 (-) 912 WP_106034855.1 TIGR01777 family oxidoreductase -
  HCU65_RS04395 (HCU65_04415) recX 908215..909006 (+) 792 WP_004430590.1 recombination regulator RecX Regulator
  HCU65_RS04400 (HCU65_04420) - 909014..909340 (+) 327 WP_219947245.1 YfhH family protein -
  HCU65_RS04405 (HCU65_04425) - 909476..910675 (+) 1200 WP_094231665.1 MFS transporter -
  HCU65_RS04410 (HCU65_04430) - 910716..910868 (-) 153 WP_004430596.1 small, acid-soluble spore protein K -
  HCU65_RS04415 (HCU65_04435) - 910985..911254 (+) 270 WP_004430597.1 YfhJ family protein -
  HCU65_RS04420 (HCU65_04440) - 911382..911918 (+) 537 WP_219947246.1 SH3 domain-containing protein -
  HCU65_RS04425 (HCU65_04445) - 912094..912441 (+) 348 WP_219947247.1 SdpI family protein -
  HCU65_RS04430 (HCU65_04450) - 912428..913294 (+) 867 WP_004430601.1 alpha/beta fold hydrolase -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30952.20 Da        Isoelectric Point: 7.4549

>NTDB_id=434097 HCU65_RS04395 WP_004430590.1 908215..909006(+) (recX) [Bacillus atrophaeus strain PENSV20]
MPFITKITTQKKTTERFNIFLDNKYAFSVDADVLVKFDLKKGKELDDLDIVEIQYGDEVKKGFNRALEFLSYRMRSTKEV
TDHLKKKEISDPAITEIIHKLNDYRYLNDKEFAEAYASTHKKTNGKGPDVLYKELRSKGIDDDTIKETLSTFSFEEQTEE
ALKHIGKILKKEKKLSTKEIKQRAQMLLQRKGFSFDVITAALEQTEYANDEDTEREALRQHAEKALRKYRYDGSYESKMK
VKQYLFRKGFSLDMIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=434097 HCU65_RS04395 WP_004430590.1 908215..909006(+) (recX) [Bacillus atrophaeus strain PENSV20]
ATGCCGTTTATCACGAAAATCACAACGCAGAAAAAAACGACCGAGCGCTTTAACATTTTTCTCGATAATAAATATGCTTT
CAGTGTGGATGCGGACGTACTCGTCAAATTCGACCTGAAAAAAGGAAAAGAACTCGACGACCTTGATATCGTTGAGATTC
AATACGGGGATGAAGTAAAGAAAGGCTTTAACCGAGCGCTTGAATTTTTATCATACCGGATGCGCTCAACAAAAGAGGTA
ACGGACCATTTAAAGAAGAAAGAAATATCAGATCCGGCCATTACAGAAATCATCCATAAGCTGAATGATTATCGCTATCT
GAATGATAAAGAGTTCGCAGAAGCTTATGCGAGCACACATAAGAAAACAAATGGAAAGGGACCGGACGTTCTTTATAAAG
AGTTAAGGTCAAAGGGGATCGACGATGATACGATCAAAGAGACACTGAGCACATTTTCTTTTGAGGAACAGACAGAAGAG
GCGCTGAAGCATATCGGAAAAATCCTGAAAAAAGAAAAAAAGCTCTCTACAAAAGAAATCAAGCAGCGAGCGCAAATGCT
TTTGCAGCGAAAGGGCTTCTCCTTCGACGTCATCACAGCGGCGCTTGAGCAGACCGAGTATGCAAACGATGAAGATACAG
AAAGGGAAGCATTACGGCAGCACGCTGAAAAGGCGCTAAGAAAATACCGATATGACGGCTCCTACGAGAGCAAGATGAAG
GTAAAACAATATTTATTCAGAAAAGGATTCTCACTGGATATGATAGACCAATTTCTACAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

82.89

100

0.829