Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BACAU_RS07255 Genome accession   NC_016784
Coordinates   1399777..1400241 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis CAU B946     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1394777..1405241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BACAU_RS07240 (BACAU_1349) - 1395257..1397077 (+) 1821 WP_014304915.1 PAS domain-containing protein -
  BACAU_RS07245 (BACAU_1350) - 1397053..1398272 (-) 1220 Protein_1397 aminotransferase A -
  BACAU_RS20775 (BACAU_1351) - 1398473..1398634 (-) 162 WP_007409608.1 hypothetical protein -
  BACAU_RS07250 (BACAU_1352) cheV 1398823..1399734 (+) 912 WP_014304917.1 chemotaxis protein CheV -
  BACAU_RS07255 (BACAU_1353) kre 1399777..1400241 (-) 465 WP_003154622.1 YkyB family protein Regulator
  BACAU_RS07260 (BACAU_1354) - 1400364..1401656 (-) 1293 WP_014304918.1 MFS transporter -
  BACAU_RS07265 (BACAU_1355) - 1401732..1402226 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  BACAU_RS07270 (BACAU_1356) - 1402301..1403164 (-) 864 WP_014304919.1 metallophosphoesterase -
  BACAU_RS07275 (BACAU_1357) fadH 1403308..1404072 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BACAU_RS20525 - 1404183..1404731 (+) 549 Protein_1405 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=43401 BACAU_RS07255 WP_003154622.1 1399777..1400241(-) (kre) [Bacillus velezensis CAU B946]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=43401 BACAU_RS07255 WP_003154622.1 1399777..1400241(-) (kre) [Bacillus velezensis CAU B946]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment