Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | PADK2_RS02075 | Genome accession | NC_018080 |
| Coordinates | 444099..444464 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa DK2 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 439099..449464
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PADK2_RS02045 (PADK2_02030) | pyrR | 439721..440233 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| PADK2_RS02050 (PADK2_02035) | ruvX | 440345..440779 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| PADK2_RS02055 (PADK2_02040) | - | 440779..441348 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| PADK2_RS02060 (PADK2_02045) | - | 441397..442290 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| PADK2_RS02065 (PADK2_02050) | gshB | 442437..443390 (-) | 954 | WP_003110019.1 | glutathione synthase | - |
| PADK2_RS02070 (PADK2_02055) | pilG | 443645..444052 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| PADK2_RS02075 (PADK2_02060) | pilH | 444099..444464 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| PADK2_RS02080 (PADK2_02065) | - | 444515..445051 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| PADK2_RS02085 (PADK2_02070) | pilJ | 445136..447184 (+) | 2049 | WP_014833866.1 | chemotaxis chemoreceptor PilJ | - |
| PADK2_RS02090 (PADK2_02075) | pilK | 447245..448120 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=43385 PADK2_RS02075 WP_003084587.1 444099..444464(+) (pilH) [Pseudomonas aeruginosa DK2]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=43385 PADK2_RS02075 WP_003084587.1 444099..444464(+) (pilH) [Pseudomonas aeruginosa DK2]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |