Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HB664_RS10740 Genome accession   NZ_CP050520
Coordinates   2288775..2289401 (+) Length   208 a.a.
NCBI ID   WP_033145121.1    Uniprot ID   A0A263VSI0
Organism   Enterobacter sp. DNB-S2     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2283775..2294401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HB664_RS10720 (HB664_10720) - 2284175..2285935 (-) 1761 WP_219940777.1 Lon protease family protein -
  HB664_RS10725 (HB664_10725) matP 2286122..2286574 (+) 453 WP_032658161.1 macrodomain Ter protein MatP -
  HB664_RS10730 (HB664_10730) ompA 2286638..2287693 (-) 1056 WP_023311028.1 porin OmpA -
  HB664_RS10735 (HB664_10735) sulA 2288048..2288557 (-) 510 WP_087822284.1 SOS-induced cell division inhibitor SulA -
  HB664_RS10740 (HB664_10740) sxy/tfoX 2288775..2289401 (+) 627 WP_033145121.1 TfoX/Sxy family DNA transformation protein Regulator
  HB664_RS10745 (HB664_10745) yccS 2289358..2291520 (-) 2163 WP_033145122.1 YccS family putative transporter -
  HB664_RS10750 (HB664_10750) - 2291540..2291986 (-) 447 WP_023311032.1 YccF domain-containing protein -
  HB664_RS10755 (HB664_10755) helD 2292110..2294164 (+) 2055 WP_219940778.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23876.44 Da        Isoelectric Point: 9.4588

>NTDB_id=433591 HB664_RS10740 WP_033145121.1 2288775..2289401(+) (sxy/tfoX) [Enterobacter sp. DNB-S2]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALGIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=433591 HB664_RS10740 WP_033145121.1 2288775..2289401(+) (sxy/tfoX) [Enterobacter sp. DNB-S2]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCATCGTGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGAGAGCTTTATCTTCGCGCCTGTG
AAGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCTGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAGCGTTATCAGCGCCATCAACGAAACCGACTCAAGGATCTGCCAAACCTGACCTTTCAGCTTGAAGTCTTGCTCT
TTGAAGCTGGCATCACCAATGAGGAAACGCTGCGGGCGCTGGGTGCCAGAGCGAGCTGGCTGAAGATGCGGGCAAAAAAC
AAAGCGCTCGGTATTAAAGTTCTTTTCGCGCTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCAGGCAT
TCGCCGGGAGCTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A263VSI0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567