Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   GM240_RS19720 Genome accession   NZ_CP050509
Coordinates   4088128..4088310 (-) Length   60 a.a.
NCBI ID   WP_053344991.1    Uniprot ID   A0AAX0RSP1
Organism   Peribacillus butanolivorans strain KJ40     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4083128..4093310
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GM240_RS19695 (GM240_19745) - 4083616..4084371 (-) 756 WP_053344996.1 YjbA family protein -
  GM240_RS19700 (GM240_19750) - 4084480..4085250 (-) 771 WP_190270122.1 DUF2268 domain-containing protein -
  GM240_RS19705 (GM240_19755) fabF 4085434..4086672 (-) 1239 WP_098174867.1 beta-ketoacyl-ACP synthase II -
  GM240_RS19710 (GM240_19760) - 4086727..4087662 (-) 936 WP_098174868.1 beta-ketoacyl-ACP synthase III -
  GM240_RS19715 (GM240_19765) - 4087859..4088080 (+) 222 WP_053344992.1 hypothetical protein -
  GM240_RS19720 (GM240_19770) comZ 4088128..4088310 (-) 183 WP_053344991.1 ComZ family protein Regulator
  GM240_RS19725 (GM240_19775) - 4088655..4089485 (-) 831 WP_190270123.1 NAD(P)-dependent oxidoreductase -
  GM240_RS19730 (GM240_19780) - 4089588..4090316 (-) 729 WP_098174870.1 alpha/beta hydrolase -
  GM240_RS19735 (GM240_19785) - 4090633..4090824 (+) 192 WP_053344988.1 YjzD family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6886.03 Da        Isoelectric Point: 4.6509

>NTDB_id=433568 GM240_RS19720 WP_053344991.1 4088128..4088310(-) (comZ) [Peribacillus butanolivorans strain KJ40]
MSSDKTLEFMGIAMKYFPEAKAKLEANGIPFSMDMAEPFMDLFKKVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=433568 GM240_RS19720 WP_053344991.1 4088128..4088310(-) (comZ) [Peribacillus butanolivorans strain KJ40]
ATGAGTTCAGATAAAACACTTGAATTTATGGGAATCGCTATGAAATACTTCCCAGAGGCTAAAGCAAAGCTGGAAGCAAA
CGGAATTCCTTTTTCAATGGATATGGCAGAGCCGTTCATGGACCTGTTTAAAAAAGTGATGCAAGAAGCATATGAGCTTG
GTAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.017

98.333

0.6